Proteus sp. NMG38-2: LG402_05880
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Entry
LG402_05880 CDS
T11216
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pron Proteus sp. NMG38-2
Pathway
pron03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pron00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LG402_05880 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pron03400
]
LG402_05880 (uvrB)
DNA repair and recombination proteins [BR:
pron03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LG402_05880 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LG402_05880 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
Kinesin
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
UDN37176
LinkDB
All DBs
Position
1246138..1248147
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AA seq
669 aa
AA seq
DB search
MSKAFKLHSEFKPAGDQPTAIASLCEGLDDGLAHQTLLGVTGSGKTFTIANVIANLNRPT
MVLAPNKTLAAQLYSEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERKDVIVVSSVSAIYGLGDPDSYLKMMLHLTNGMIIDQRAILRRLADLQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDYALRVELFDEEVERLSLFDPLTGQIHYNVPR
FTVYPKTHYVTPRERILEAMEEIKKELAERRKVLLANDKLVEEQRVTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPANGLLVIDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPLRFEEFEALAPQTIYVSATPGKYELEKSGDEIVEQVVRPTGLLD
PIIEVRPVTTQVDDLLSEIRIRAEKNERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLEGKAILYGDRITDSMAKAIGETERRREKQQQFNLEHGIVPKGLNKKVGDILKIG
QPSQGRNKKGHKAKDIHENYPLLSTAELEKEIQRLEAEMYQHAKDLEFEKAASTRDKLQA
LRAQFIANS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcttttaaactgcattctgaatttaagcctgctggtgatcaacctacggct
atagcttcactttgtgaaggattagacgatgggcttgcacatcaaacccttttaggggta
actggttcaggtaaaacttttactattgctaatgtgatagccaacttaaatcggcctacg
atggtgcttgcgccaaataaaaccttagcagcgcagctttacagtgaaatgaaagaattc
tttcctgaaaatgcagtggaatactttgtttcttattacgattattatcagccagaagcc
tatgtaccaagttctgacacctttattgaaaaagatgcttctgttaacgaacatattgaa
caaatgcgtctgtctgccactaaagccctattagagcgtaaagacgtgattgtggtgtca
tccgtttctgcgatttatggtttaggtgatcctgatagctatttaaaaatgatgcttcac
cttacaaacggcatgataatcgaccaacgtgcaattttgcgtcgtctcgctgatctacaa
tatactcgtaatgatcaagcttttcagcgcgggacatttcgtgtccgtggtgaagtgatt
gatatctttcctgctgaatctgatgattatgcattacgtgttgagctctttgatgaagaa
gtcgaacgtctttcactgtttgatcctttaactgggcaaattcactataatgtgcctcgt
tttaccgtttatcctaaaacgcactatgtcaccccgcgtgaacgaatacttgaagcgatg
gaagaaatcaaaaaagaactcgcagagagacgtaaagtacttttagctaacgataaactt
gttgaagagcaacgcgtaacacagcgtactcaatttgatctcgaaatgatgaatgagttg
gggtattgctccggtatcgagaactattcacgttatttatcgggtagaggccccggtgag
ccacctccaaccctgtttgattaccttcctgctaacggtttattagtgattgatgaatca
cacgttactattcctcaaattggtggaatgtataaaggtgaccgctcgcgtaaagaaacc
ttagttgaatatggcttccgtttaccttctgcgcttgataaccgtccattgcgtttcgaa
gaatttgaggcgttagcaccacaaacgatttatgtttcagcaacaccaggtaaatatgag
cttgaaaaatcaggtgatgaaattgtcgaacaagttgtaagaccaacaggtttacttgat
ccgattattgaagtgcgacctgttacgacacaagttgatgatttgctttctgaaattcgt
attcgtgctgagaaaaatgaacgtgtattggttaccacattaacaaaacggatggcagaa
gatttaacagaatatttagaagagcatggtgagcgagttcgctatttacactctgatatc
gatactgttgaacgtgttgaaattattcgtgatttgcgccttggtgagtttgatgtatta
gtcggtatcaacttactccgagaggggttggatatgccagaggtctctttggtggccatt
ttggatgcagataaagaaggtttcttgcgttcagagcgttcattaattcagactatcggt
cgtgcggctcgtaaccttgaaggtaaagcaattttatatggcgatagaattacggactca
atggcgaaagcaattggtgaaactgaacgtcgtcgtgagaaacagcaacaatttaacctt
gaacatggcattgtacctaaagggttaaacaagaaagtcggggatattcttaagattggt
caaccttctcaaggtcgtaacaagaaagggcataaagcaaaagatattcatgaaaattac
ccattattatcgactgctgaattggaaaaagagatccagcgtttagaagctgaaatgtac
caacatgccaaagatcttgagtttgaaaaagccgcaagtacgcgagataaactacaagcg
ttgcgtgctcaatttattgcgaactcttaa
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