Proteus sp. NMG38-2: LG402_16960
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Entry
LG402_16960 CDS
T11216
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pron Proteus sp. NMG38-2
Pathway
pron03030
DNA replication
pron03430
Mismatch repair
pron03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pron00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG402_16960 (dnaE)
03430 Mismatch repair
LG402_16960 (dnaE)
03440 Homologous recombination
LG402_16960 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pron03032
]
LG402_16960 (dnaE)
03400 DNA repair and recombination proteins [BR:
pron03400
]
LG402_16960 (dnaE)
Enzymes [BR:
pron01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG402_16960 (dnaE)
DNA replication proteins [BR:
pron03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LG402_16960 (dnaE)
DNA repair and recombination proteins [BR:
pron03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LG402_16960 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UDN35400
LinkDB
All DBs
Position
complement(3568769..3572251)
Genome browser
AA seq
1160 aa
AA seq
DB search
MADPRFIHLRVHSDYSMIDGLAKTGPLVKKVASLGMPAFAITDFTNLCGLVKFYGAAHSA
GIKPIIGADVYLETELLGDEYAHLTILARNNVGYQNLTLLISEAYKHGYGAAGPIIKQEW
LTTYKEGLLLLSGGRMGDVGKFLLRGNRALVDQCLEYYQTHFPDSYYLELIRTGRPDEES
YLHEAVALASEKGLPVIATNDVCFLDSDDFDAHEIRVAIHDGFTLSDPKRPKNYSPQQYM
RTEEEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLVKKSQEGL
EERLAFLFPDPEERKKRRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYSLKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIDHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKSLIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKKSLEPIDISAIPLTDQRSFDML
QRSETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGVEE
ISYPDVKWQHESLQPVLEPTYGVILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAIKNGVDGELAMRIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIVEARQQGGHFKDIFDLCARTETKKLNRRVMEKLIMSGAFDKLGPHRAALMS
SLEDALKAADQHAKAEAIGQSDMFGVLAEAPEQVERSYANIPKWPEQVVLEGERETLGLY
LTGHPITRYLKEIERYAAGTRLKDLVPTPRGQMVKVAGLVLASKVFTTKRGNRIGICTLD
DRSGRLEIMLFSDALDKYQHLLEQDKILIATGQVSFDDFNGGLKMTVRELMDINEAREKY
ARGLAISLSDRQINEQLLNRLRGVLEPHRSGTIPVHLYFEKHDACARLRFGASWRVTPTD
MLLTDLRTLLGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctcgttttatccatcttagggtacacagcgattattcaatgatcgatgga
ttggcaaaaacagggcctcttgtgaagaaagtggcttcgctgggaatgcctgcttttgcg
attactgatttcactaacttatgtgggttagtgaagttttatggtgccgcacatagtgca
ggcattaaacctatcattggtgccgatgtttacctcgaaacagaattattaggtgatgaa
tatgcacacctcactattcttgcccgtaataatgtaggttatcaaaatcttaccttactg
atttcagaagcttacaaacatgggtatggtgctgctgggccgattattaaacaagagtgg
ctaacaacctataaagaagggctcttgttgctttcgggtggaagaatgggcgatgtaggc
aagttcttgcttcgtggaaatcgtgccttagttgatcaatgtcttgagtattatcaaact
cactttcctgatagttattatttagaacttatccgaactggtcgccctgacgaagaaagc
tatttgcatgaagctgtagctctcgcttctgaaaaaggtttacccgttattgcaacgaat
gacgtctgttttcttgatagtgatgattttgacgcacatgaaattcgcgttgcaatccat
gatgggtttacactctcagatcccaagcgtccaaaaaattatagccctcagcaatatatg
cgcacagaagaagagatgtgtgaattatttgctgatatacctgaagcattagaaaacagc
gttgaaatcgccaaacgttgtaatgttaccattcgtttaggggaatactttcttcctcaa
ttcccaacaggggatatgagtactgaagattttctcgttaaaaaatctcaagaaggtttg
gaagagcgtttggcttttctgtttccagatcccgaagaacgaaaaaaaagacgtcctgaa
tacgatgaacgtcttgatatagagctaaaagtaatcaaccagatgggattccctggttac
ttccttatcgtgatggagttcattcagtggtctaaagataacggtgttcctgtagggccg
ggacgaggttcgggggctggatcattagttgcttactcactcaaaattactgaccttgat
cctctggaatttgatttacttttcgaacgttttcttaaccctgaacgtgtttcaatgcct
gactttgacgtcgatttctgtatggaaaaacgcgatagggtaattgatcacgttgcagat
atgtatggtcgtgatgcggtatctcagatcattacatttggtacgatggcggcaaaagcg
gttatccgagatgttggacgtgttttaggacatccttacggttttgtcgatagaatttcg
aagcttgtaccgcctgatcctggaatgacgctagaaaaagcatttgcagcagaacctcag
ttacctgaaatttatgaagctgatgaagaggttaaatctcttattgatatggctcgtaaa
ttagaaggggtgacacgtaatgccggaaaacatgcgggtggtgtagttatatcaccaaca
aaaattaccgattttgcgccgctttattgtgacgcagaaggaaataacccagttacacaa
tttgataagaatgacgttgaatatgcaggtcttgtcaaattcgacttcttgggattaaga
acactcactatcattaactgggcattagaaatgattaatgcccgccgtgaaaaaaaatca
ctggaacctattgatatctctgcgatcccattaacagatcagcgtagtttcgatatgctg
caacgttctgaaacgaccgcggtattccagttagaatcacgtggtatgaaagatcttatc
aagcgtctacgtcctgactgctttgaggatatgattgcgttagtggccttatttcgccca
ggtccattgcaatcaggtatggtggataactttattgaccgtaaacacggcgttgaagag
atctcttatccagatgttaaatggcaacacgagagcttgcagcctgttttagaacctacc
tatggcgttatcttatatcaagaacaggttatgcaaattgcgcaggttcttgctggatat
acgctgggtggcgcggatatgttacgacgcgcaatgggtaagaaaaaacctgaagagatg
gcaaagcagcgctctgtatttgaagaaggggctatcaaaaacggtgtagatggcgaactt
gccatgcggatctttgacttggtggagaaatttgccggttatggatttaataaatcgcac
tcagctgcttatgctttagtttcttatcaaacgttatggctaaaagcccactatcctgct
gaatttatggctgctgtaatgacggctgatatggataacacagaaaaagtggtgggatta
gttgatgaatgttggagaatgggattaaaagttcttcctcctgatattaatagtggttta
tatcattttcacgtaaatgatgaaggtgaaatcgtttacggtattggtgcgattaaagga
gtgggtgaaggtccaattgaggcaatcgtagaagcgcgtcagcaaggcggccactttaaa
gatatttttgatctctgtgctagaacagaaacgaaaaaattgaatcgccgagtgatggaa
aaactgataatgtcaggcgcattcgataagctagggcctcatcgtgccgcattgatgtct
tcattagaagatgcattaaaagctgctgatcaacatgccaaagctgaagcaatagggcaa
tcagatatgtttggcgtgttagcagaagctcctgaacaagttgagcgttcttatgccaat
atacctaaatggccagaacaagttgttttagaaggtgagcgagagacattaggtttatat
ttaacaggtcatccgatcacacgttatttaaaagaaattgaacgatatgcagcaggaacg
cgtctaaaagatttagtaccaacgccacgcggtcaaatggtgaaagtcgcgggcttagtg
ctcgcttctaaagtatttacgacaaaacgaggaaatcgaattggcatatgtaccttagat
gatcgttcaggtcgcttagaaattatgttattttctgatgcattggacaaataccaacat
ttattagaacaagacaagattttaattgctactgggcaggtcagctttgatgatttcaat
ggtgggcttaaaatgacagtccgcgaacttatggatatcaacgaagcccgtgaaaaatat
gcacgaggacttgctatctcattatcagacaggcaaattaatgagcaattattaaatcgt
cttcgcggcgttttagaacctcatcgttcaggcacgataccggttcatctttattttgaa
aagcatgatgcctgcgcacgtttacgatttggtgcgtcttggcgtgtaacgccaactgat
atgcttttaacagatctgcgaactctgctgggtaatgagcaggtagaattagaatttgac
taa
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