Proteus sp. NMG38-2: LG402_17165
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Entry
LG402_17165 CDS
T11216
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pron Proteus sp. NMG38-2
Pathway
pron03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pron00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LG402_17165 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pron03400
]
LG402_17165 (recD)
Enzymes [BR:
pron01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LG402_17165 (recD)
DNA repair and recombination proteins [BR:
pron03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LG402_17165 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
Viral_helicase1
SH3_13
AAA_11
AAA_22
SLFN-g3_helicase
UvrD-helicase
UvrD_C
PhoH
nSTAND3
AAA_16
AAA_28
NB-ARC
DEAD
SRP54
AAA
AAA_33
NPHP3_N
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UDN35436
LinkDB
All DBs
Position
complement(3613009..3614919)
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AA seq
636 aa
AA seq
DB search
MIKLLEQAITQNVLRPLDLRFAQMLVEDENPILLFIFAYLSTQTGAGHVCLPLNIIKENQ
LFDGRQDELARAIWQRMGEPSTDQIIEALIHSHCVNQGGDNSPSPIILDNGLLYLQRMWS
YEEKVAQFFRQEHPVVDIDENALIKALNQLFPTAKENKETNWQKVAASVAITSPISIISG
GPGTGKTTTVAKILAAFVMLTSNEKPIIQLAAPTGKAAARLTESLGKALAQLALSEEENK
WMPKQAQTIHRLLGAQPESQQVRYHKDNPLQLDILVVDEASMVDLPMMARLIDALPQQCH
VIFLGDKDQLASVEAGAVLGDICRFADDGLSQKRFDKIDYLTQGELSKSADIISVSNTPV
SVVSDSLCLLRKSYRFGSNSGIGQLAFAVNQGQTKTALTLLKKAVITPQQIEMALDTQDV
NFIPLESDENYLLMIQDAAQAYRQYLSLIAEKATPDAILNAFNQYRLLCALREGPFGVSG
LNDRIEMLLHRQRLIRRPTNSYQSDYIGRPIMIQRNDSTLGLFNGDIGIMLNNDEGEMKA
FFQLPDGTLKAIQPSRLPQHETAYVMTVHKSQGSEFTHTALVLPEKFSPVVSRELLYTAL
TRAKQKLSLYACEYMVKMAIQTRIQRRSGLVDKLRY
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaactattagaacaagcgattacacaaaatgtattacgaccgttagatcttcga
tttgcacaaatgctggtggaagatgaaaatccgattttactgtttatctttgcttattta
agcactcaaacaggagctggacatgtttgtttgccattaaatattatcaaagaaaatcaa
ttgtttgatggtaggcaagacgaacttgctcgcgctatttggcaaagaatgggagagcct
tctactgatcaaataattgaagcgttaatacatagtcattgtgttaatcaaggtggtgat
aattctccatcacctatcattttagataatggacttctttatctgcaaagaatgtggagc
tatgaagaaaaagtggctcaattttttaggcaagaacatccggtggttgatattgatgaa
aatgcattaattaaagcactcaatcagctttttccaacagcaaaagaaaataaagaaact
aattggcagaaagtagctgccagtgttgctatcactagccctatctctattatctctggc
ggcccaggaacaggaaaaaccacaacggtggcaaaaatcttggctgcttttgtgatgctt
acttcgaatgagaaacccattattcaattagcagcaccaactggaaaagctgctgcccga
ttaacagaatccctaggtaaagcacttgctcaacttgctttaagtgaagaagaaaataag
tggatgccaaagcaagcacaaactattcatcgtttgttaggggctcagccggaaagccag
caagtgcgttaccataaagataatccattacaacttgatattttagtggttgatgaagcg
tcaatggttgatttacctatgatggctcgcttaattgatgcactcccacagcaatgccac
gttattttcttgggagataaagaccaactcgcttctgttgaggctggagctgtattaggg
gatatttgccgttttgcggatgatggtttgagccaaaagcgatttgataaaattgattat
ttaacacaaggtgagttatcaaaatctgcagatattatctctgtttctaacacacccgtt
tcagttgttagtgattcactttgcctattacgaaaaagctatcgatttggctcgaattca
ggaattggtcaacttgcttttgctgtaaaccaaggacagaccaaaacagcactgacattg
ctgaagaaggcagtaattacgcctcaacaaattgaaatggcactagatactcaagatgtg
aattttatcccattagagagtgatgaaaactacttactgatgatacaagatgcagcacaa
gcctatcgccagtatctctcattgatagcagaaaaagccactcctgatgcgatccttaac
gcatttaaccagtatcgtttattgtgtgcattaagagaagggccatttggtgtaagtggg
ttaaatgatcgaattgaaatgctattgcaccgtcaacgattaattcgtcgccctacaaat
agctatcagagtgactacattggacgtccgattatgatccagagaaatgatagtacactt
gggctgtttaatggtgatattggtattatgctcaataatgatgaaggcgaaatgaaagcc
tttttccaattgccagatggtaccttaaaagccattcaacctagccggttacctcaacac
gaaacggcgtatgttatgacagtgcataaatcacagggatctgaatttacacatacagca
ttagtattacctgaaaaattttcgccagtggtcagccgtgaattactgtacaccgcctta
actcgcgctaaacaaaaactttctctttatgcctgcgaatatatggtgaaaatggctatt
caaacacgtattcagcgtcgaagtggtttagtcgataagttacgttactaa
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