Proteus sp. NMG38-2: LG402_19160
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Entry
LG402_19160 CDS
T11216
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pron Proteus sp. NMG38-2
Pathway
pron03030
DNA replication
pron03410
Base excision repair
pron03420
Nucleotide excision repair
pron03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pron00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG402_19160 (polA)
03410 Base excision repair
LG402_19160 (polA)
03420 Nucleotide excision repair
LG402_19160 (polA)
03440 Homologous recombination
LG402_19160 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pron03032
]
LG402_19160 (polA)
03400 DNA repair and recombination proteins [BR:
pron03400
]
LG402_19160 (polA)
Enzymes [BR:
pron01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG402_19160 (polA)
DNA replication proteins [BR:
pron03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LG402_19160 (polA)
DNA repair and recombination proteins [BR:
pron03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LG402_19160 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LG402_19160 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
WHD_BrxR
HTH_KIF26A_B_1st
Motif
Other DBs
NCBI-ProteinID:
UDN35812
LinkDB
All DBs
Position
complement(4084721..4087519)
Genome browser
AA seq
932 aa
AA seq
DB search
MVQIAENPFILVDGSSYLYRAYHAFPPLTNSQGEPTGAMYGVLNMLRSLIIQYKPSHVAV
VFDAKGKTFRDELYEEYKSNRPPMPDDLREQIAPLHEMVQAMGLPLLSISGVEADDVIGT
LALKAAAGGRDVLISTGDKDMAQLVTPKITLINTMTNVILGPDEVKEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTALGLLQGIGSLDDIYQQLDNIATLSFRGAKTLGAKMAEHE
KVAKLSYKLATIKTDVELDKTFDDLVVNEPNLDQLLEMFTRYEFKRWISDLQNGGWLAQR
STHKVAVPYTSEVAKPKEASISANFPVITQENYEAILTHESLAHWVELLKKAPAFAFDTE
TDSLNNIDARLIGMSFAIEPGKAAYIPLRHEYLDAPDQLPLDDVLTALKPILEDKNILKI
GQNLKFDRGIMENEGIELNGIHFDTMLESYVLNSVSNRHDMDTLAEKHLNHKTTTFEEIA
GKGKGQLTFNQIEVEQATLYAAEDADITLLLHQALYPQIEAIEPLKHVYRDIEMPLVPVL
SRMERKGVLIDAQVLAVQSQEITQRLAEIEKETFALAGQEFNLSSPKQLQEILFDKLQLP
VIKKTPKGAPSTNEEVLEELAHSHELPRLILEHRGLAKLKSTYTDKLPLMVNSKTKRVHT
SYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAREGFKIVAADYSQIELRIMAHL
SQDKGLLDAFAQGKDIHRATASEVFGIPLEEVTSEQRRSAKAINFGLIYGMSAFGLSQQI
GVERREAQRYMDLYFERYPGVLDYMERTRKQASEQGYVETLDGRRLYLPEINSKNAIRRK
ASEREAINAPMQGTAADIIKKAMIAVDHWICNECSDDVHMIMQVHDELVFEVRESYLEKA
NTMIHKLMEGSMELAIPLKVEVGVGNNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggtccagatagcagaaaacccctttatccttgtagatggctcctcatatctttatcgt
gcctatcatgcttttccaccgctaactaatagccaaggtgaaccaactggtgcaatgtat
ggtgtgttgaacatgttacgtagtctgataatacagtataagccaagccatgttgcggtt
gtgtttgacgctaaaggtaaaacattccgtgatgaattgtatgaggaatataaatctaac
cgtcctccaatgccggatgatttacgtgagcaaatagcacctttacatgaaatggtacag
gcaatgggtttacccttgctatctatttcaggtgtggaagcagacgatgtcattggaaca
ctggcactaaaagcagctgctggcggacgtgatgtcctaataagtacaggtgataaagat
atggcgcagttagtgacgccaaagatcacgcttattaacactatgactaacgttatttta
ggccctgatgaagtcaaagaaaaatatggcgttcctcctgaactgattattgatttcctc
gcattaatgggagattcatcagataacattccaggtgttcctggtgtcggtgagaaaaca
gcattagggcttttacaaggaattgggagtttagacgatatttatcaacagcttgataat
attgcaacgttaagtttccgtggtgctaaaacacttggcgctaaaatggcagagcatgag
aaagtggcaaaactttcttataaactggcaacgattaaaacggatgttgaactcgataaa
acgtttgatgatttagtggttaatgagccaaatttagatcaattattagagatgttcacg
cgttatgaatttaaacgctggataagtgatcttcaaaatggtggctggttagcacagcgt
agcactcataaagttgcggtgccttatacctctgaagtcgcaaaacccaaagaagcatct
atatcggctaatttccctgtgatcacacaagaaaattatgaggcgatattaacgcatgaa
agcttagcacactgggttgagcttcttaaaaaagcccccgcatttgcattcgatacagaa
actgacagcttaaataatattgatgcacgtttaattggcatgtcgtttgcgattgagcca
ggcaaagcagcttatattccgttacgtcatgagtatttagatgcgccagaccaacttcct
ctggatgatgttctgacagcattaaagcctattttagaagataaaaatatcttaaagatt
gggcaaaacttgaaatttgaccgtggcattatggaaaatgaaggtatcgaattaaatggt
atccattttgatacgatgttggaatcttatgtattaaatagtgtcagtaatcgacatgat
atggatacgttggctgaaaaacatttaaaccataaaactaccacatttgaagaaattgcg
ggtaaaggtaaagggcaactgactttcaatcaaattgaagttgaacaagcaacgctatat
gcagctgaagatgccgatatcactttattacttcatcaagctctgtatcctcaaatagaa
gctattgaaccacttaaacatgtttaccgcgatattgaaatgccattagtccctgtactt
tctagaatggaacgcaaaggagtattaattgatgctcaagttttagcagttcaatctcaa
gaaattacacaacgtttagctgaaattgaaaaagagacgtttgcgttagctgggcaagaa
tttaatctctcttcacctaaacagttacaagaaatcttatttgataaactgcaattacct
gttatcaagaaaaccccgaaaggggcgccatcgactaatgaagaagtattagaagagtta
gcgcatagtcatgaattaccacgtttaattttagaacatcgcggacttgcgaaactaaaa
tctacctatactgataaattaccattaatggtgaatagtaagacaaagcgtgtacatact
tcttatcatcaagcagtgaccgcaacaggtcgtttatcatcacgggatcctaatcttcaa
aatattccagtgagaaatgaagaaggacgccgtattcgccaagcctttattgcgcgtgaa
ggatttaaaattgttgcagccgactattcacagattgaattgcggattatggcacattta
tcgcaagacaaaggtttgttagatgcttttgctcaaggtaaagatattcaccgtgcaacc
gcatctgaagtgtttggcatacctttagaggaagtaacctctgaacagcgccgtagtgcg
aaagcgatcaactttggtcttatttatggcatgagcgcatttggcttatctcaacaaatt
ggtgttgagagaagagaagctcaacgctatatggatctctattttgagcgttatccaggc
gtattggattatatggagcgcacacgtaaacaagcttctgagcaaggctatgttgaaacg
ttagatggtcgtcgcctctatttaccagaaattaattcgaagaatgcaattcgtcgtaaa
gcttcagaacgtgaggctattaatgcaccaatgcaaggtactgctgctgatatcatcaaa
aaagcgatgattgcagtagatcattggatttgtaatgaatgctctgatgatgtgcatatg
atcatgcaagtacacgatgaattagtgtttgaagtgcgagagtcttatttagagaaagca
aacaccatgatccacaaattgatggaaggtagtatggaattagctatcccattaaaagtc
gaagtgggtgtgggtaataactgggatgaagcacattaa
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