Paenibacillus roseopurpureus: MJB10_02815
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Entry
MJB10_02815 CDS
T10989
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
proo Paenibacillus roseopurpureus
Brite
KEGG Orthology (KO) [BR:
proo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
proo03009
]
MJB10_02815 (rlmD)
Enzymes [BR:
proo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MJB10_02815 (rlmD)
Ribosome biogenesis [BR:
proo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MJB10_02815 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_11
PrmA
PCMT
Ubie_methyltran
Methyltransf_32
N6_N4_Mtase
CMAS
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
WNR45099
UniProt:
A0AA96LS74
LinkDB
All DBs
Position
596307..597797
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AA seq
496 aa
AA seq
DB search
MKAKGTSGSAPGKHRGSGKSGAAGRAGNSAGNRGKAKEVPAWMADLPVKIGQQVEAEIVG
ISHDGEGVGRANGFTLFVAGALPGERALVRVEHLKKQYGYAALVELLETSPDRVAPDCLI
YEECGGCQLQHLSYEAQLRVKRQQVVDNLVRIGKLENIIVHPTLGMADPWRYRNKAQVPF
GEERGGLIGGFYAQGSHRIIDMEACLIQHEANDEVVARVKEIGSRLGIRAYREETGTGLL
RHVVVKVGFRTGEIMVVLVTNGADIPRVDEWVAGIREALPAVKSICHNINVRQTNVIFGD
ETRVLWGSEVIYDYIGDVKFAISARSFFQVNPVQTEVLYGKALEYAALTGGETVVDAYCG
IGTISLFLAQRAGQVYGVEIVEEAISDARKNAALNGMMNVHFEAGPAEVVLPEWTRQGVR
PDVIVVDPPRKGCDPALLATILELRPRRVVYVSCSASTLARDLRVLVDGGYGVAEVTPVD
MFPHTVHVESVALLVR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaaggtacatctggctccgcgccaggtaaacatagaggtagtgggaagtcg
ggagctgctggaagagcgggaaattcggcaggcaacagaggtaaggcgaaagaagtgcca
gcttggatggcggatctgccagtgaagatcgggcagcaagttgaggccgagatcgttggg
atcagccatgatggtgaaggggtaggccgcgcgaacggctttaccctttttgtcgcgggg
gcgctgccaggtgagcgtgcgctcgtgcgtgtggaacatttgaagaagcagtatgggtat
gctgctttggtggaattgttggagacgagtccggatcgcgttgctcccgactgtctgatc
tatgaggagtgtggcggctgtcagctgcagcatttgagctatgaggcgcagcttcgcgtg
aagcggcagcaggtcgtggataatttggtgcggattgggaagttggaaaacatcattgtt
catcccacgttggggatggccgatccgtggcggtatcggaacaaggctcaggttcctttc
ggggaagagcggggcggcctcatcggcggattctatgcgcagggtagccatcgcatcatt
gatatggaggcttgcttgatccagcacgaagcgaacgacgaagtcgttgcgcgggtgaaa
gagatcggctcgcggcttggcatccgcgcgtatcgggaagagacggggactggcttgctg
cgccatgtcgtcgttaaagtcggcttccgcacgggtgagatcatggtcgtcttggtgacc
aatggcgcggacattccgcgtgtggacgaatgggttgctggcattcgcgaggcgctgcct
gcggtgaagagcatttgccataacattaatgtgagacagaccaatgttatttttggggat
gagacgcgcgtcctgtggggtagcgaagtcatctatgactatatcggcgatgtgaaattt
gcaatttccgcgcgatccttctttcaagtgaaccccgtccagacggaagtcttgtacggg
aaggcacttgagtacgccgcgctgacaggcggcgaaacggtcgtcgatgcctattgcggc
atcggcacgatttccctgttcctggcgcagcgcgcgggacaggtgtacggcgtcgagatc
gtcgaagaggcgatctcggatgcacgtaagaatgccgcgttaaacggcatgatgaacgtg
cacttcgaggcaggaccggccgaggtcgtcctgccggagtggacacgtcagggcgttcgg
cctgacgtgatcgtggtcgacccgccgcgcaaagggtgcgacccagcgctgctcgcgacc
atcctcgagctgcggccgcggcgcgtggtgtacgtgtcgtgcagcgcatcgacactcgcg
cgcgacctgcgcgtgctggtcgacggcgggtacggcgtcgcggaggtgacgccggtggat
atgttcccgcatacggtgcatgtggagtcagtggcattgctggtgaggtaa
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