Paenibacillus roseopurpureus: MJB10_04895
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Entry
MJB10_04895 CDS
T10989
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
proo Paenibacillus roseopurpureus
Pathway
proo02020
Two-component system
proo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
proo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MJB10_04895 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MJB10_04895 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
proo03021
]
MJB10_04895 (rpoN)
Transcription machinery [BR:
proo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MJB10_04895 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_Crp_2
Sigma70_r4
HTH_AraC
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WNR45476
UniProt:
A0AA96LRZ6
LinkDB
All DBs
Position
1096383..1097675
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AA seq
430 aa
AA seq
DB search
MSQGYRLFQQQSTKLQLSPQLRQAITLLQLSTPDMLQAIQQEVEGNPLLEYEKGYGRTAE
AEFNPHYNVVSNKMTLERHLKEQLLFTPELSVDVRRILSFLIGNLDANGYLTISMPDAAN
YLRVTQAGCEEALRVLQGLEPAGIGARNLQECLLLQIQRTTSSEGGSLMEELVRHHLPDI
SRNRLTAVSVKLQVPLSELQAAVMDIKRLNPRPAASYHTETVPYILPEVVFVKQGDRYAA
YTYEAAWPRLTLNTTYERMARERNGSAEATTFVQSKLYAARFFLRSLEQRRQTILRVAQC
MAEEQHEFFMKGAASQKPMTLKIIADQLGLHESTVSRATSGKYAQTPWGIRELKSFFSSS
LSTEQGDAASSAAVKALLKTWIGKEKHDQPYSDQKLADLLAQSGISISRRTVAKYREELR
IPSSQLRKRI
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggggtatcgcctgtttcagcagcaatcaaccaagctgcaattatcaccgcaa
ttgcgtcaagcgattacacttcttcagctttctacacctgacatgctgcaagccattcag
caagaagtagagggaaatcccctattagaatacgagaaggggtatggaagaacggcagaa
gcagagttcaatccccactataacgtggtttcgaacaagatgacgctggagcggcatttg
aaagagcagcttctttttactcccgaattatcagtggacgttcgccgcatccttagtttt
ctgatcggcaatctggacgcgaatggttacctaactatatccatgcctgacgctgccaat
tacttgcgtgtcacgcaagctggttgcgaagaggcgcttcgtgttttacaaggactcgaa
cccgcaggcattggggcacgcaatttacaagaatgcctgctgttgcaaattcagcgaacc
acatccagcgaaggcggctccctcatggaggagctcgtccgccaccatttgccagacatc
agccgtaatcggttaacagccgtatctgtaaagctgcaggttcctttgtcagagctgcag
gcagccgtcatggatatcaaaaggttaaatccacggccagctgccagctaccatacggaa
accgtgccttatatcctgcctgaagtcgtgttcgtcaaacagggcgatcgctatgcggcc
tatacctatgaggcggcttggccacgattaaccttgaataccacgtatgagcggatggca
cgcgagaggaatggcagcgcagaggcgacgacatttgtgcagagtaaactatatgcagcc
cgcttttttctgcgaagcctagagcagcgccgccaaaccattttgcgtgtcgcgcaatgc
atggcggaggagcaacatgaattcttcatgaagggagcagccagtcaaaagccgatgacc
ctgaagatcatcgccgatcagcttggcctgcatgaatcaacggtaagccgtgctacctca
ggaaagtacgcccagacgccatggggcatccgtgagctgaagtcgtttttctcttcaagc
ttatcaaccgaacagggagacgcagcctcgtcggcagcggtgaaggcactgcttaaaaca
tggatcgggaaagagaagcacgatcagccatattcggatcagaaactagctgatctgctc
gcacaatcgggcatttccatctcaagaagaacggtagccaaataccgagaagagctgcga
attccttcttcccaactcaggaaacgcatatag
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