Paenibacillus roseopurpureus: MJB10_19040
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Entry
MJB10_19040 CDS
T10989
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
proo Paenibacillus roseopurpureus
Pathway
proo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
proo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MJB10_19040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
proo03019
]
MJB10_19040
03009 Ribosome biogenesis [BR:
proo03009
]
MJB10_19040
Enzymes [BR:
proo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MJB10_19040
Messenger RNA biogenesis [BR:
proo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MJB10_19040
Ribosome biogenesis [BR:
proo03009
]
Prokaryotic type
rRNA helicases
MJB10_19040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_22
CA109-like
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WNR43192
UniProt:
A0AA96RLH8
LinkDB
All DBs
Position
complement(4263045..4264655)
Genome browser
AA seq
536 aa
AA seq
DB search
MKTFQEFGLDASVLRAITEMGFEESTPIQEKTIPLAMEGRDLIGQAQTGTGKTAAFGIPL
VNKINIKEERISALIMCPTRELAIQVAEEIEKLGRFKGIRSLPIYGGQDIVKQIRALKKK
PQIIIGTPGRLLDHINRKTIKLDDVQTVILDEADEMLDMGFMEDIQSILKLVPEERHTML
FSATMPTNIQRLAQQFLRNPEHVSVIPKQVSAPTIEQAYIELHEKQKFEALSRLIDMEAP
DLAIIFGRTKRRVDELAEALQKRGYAAEGLHGDLSQNQRDNVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGTAWTFVTPREIDHLHFIEKVTR
HKINKKPLPSLAEAIEGKQKMTAERILDVLQKEEHSEFKGLAIQMLEQYDSVNLLAAAMK
LLTGDKKDLTIELTPEDPIRARKKKFDVRSSGRRVGGGYGSGSGDRRQGGGYGSGSGTGG
SSSNSRYPRKDSRDYGSNREGGSSSSSRNRDYGSNNSGNRDRSRAPRKSEDTLVNK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacatttcaggagtttggtttagacgcatcggtattgcgtgcaattacagaaatg
ggctttgaagagtccacaccaatccaagagaaaacaattccactggccatggaaggccgt
gatttgatcgggcaagcacaaacaggaacagggaaaactgcagcattcggtattccgctt
gttaacaaaatcaacattaaagaagagcgcatttcggcattaatcatgtgtcctacacgg
gaacttgccatccaggttgcggaagagattgaaaaactcggtcgtttcaaaggcattcgt
tctttgccaatttatggtggacaggacatcgtaaaacaaatccgtgcattgaaaaagaaa
ccacaaatcattatcggtacaccaggacgtcttcttgaccacattaaccgtaaaacaatt
aagcttgatgatgtacaaacggttattctggatgaagcggatgaaatgttagacatgggc
ttcatggaagatatccaatccattttgaagcttgtaccagaagagcgtcacacgatgttg
ttctcggcaactatgcctacgaacattcaacgtcttgctcaacagttcctgcgtaaccca
gagcacgtttccgtaattcctaaacaagtgagtgcccctacaattgagcaagcttatatc
gaacttcacgagaaacaaaagtttgaagcgcttagccgtttgatcgatatggaagcgcca
gatttggctataattttcggccgtacgaaacgtcgtgtagatgagcttgcagaagctctt
caaaaacgtggttacgctgctgaaggtctacatggtgacttgtcccaaaatcaacgtgac
aacgtgatgagaaaattccgcgatggcagcattgatgtgctggttgcaacagacgttgcg
gcacgtggacttgacgtttcgggtgtaactcacgttattaacttcgatcttccgcaagat
ccagaaagctacgttcaccgtatcggccgtacaggtcgtgctggtaaagaaggtactgct
tggactttcgtaacaccgcgtgaaattgatcaccttcacttcattgagaaggttactcgt
cataaaattaacaaaaaacctttgccaagcttagctgaagcgatcgaaggtaaacaaaaa
atgacagctgagcgtatattggatgttcttcaaaaagaagagcattccgaattcaaaggc
ttagcgattcaaatgcttgagcaatacgattccgttaacttgcttgcagctgcaatgaaa
ttgttgactggcgacaagaaagatttaacaatcgaattgacaccagaagatccaatccgt
gcaagaaagaaaaaattcgacgttcgcagctcaggtcgtcgcgttggcggtggatatggt
tcaggttcaggcgatcgtcgtcaaggcggaggctatggcagcggttctggaacaggtggt
tccagctccaactcccgttacccgcgtaaagatagcagagactacggttcaaacagagaa
ggcggaagcagctcttcctccagaaaccgtgattacggcagcaacaactctgggaaccgc
gatcgttccagagctccacgtaaaagcgaagatacacttgtaaataaataa
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