Paenibacillus roseopurpureus: MJB10_19895
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Entry
MJB10_19895 CDS
T10989
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
proo Paenibacillus roseopurpureus
Pathway
proo03030
DNA replication
proo03430
Mismatch repair
proo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MJB10_19895
03430 Mismatch repair
MJB10_19895
03440 Homologous recombination
MJB10_19895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proo03032
]
MJB10_19895
03400 DNA repair and recombination proteins [BR:
proo03400
]
MJB10_19895
Enzymes [BR:
proo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MJB10_19895
DNA replication proteins [BR:
proo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MJB10_19895
DNA repair and recombination proteins [BR:
proo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MJB10_19895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WNR43355
UniProt:
A0AA96RJ07
LinkDB
All DBs
Position
complement(4437636..4441226)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAARMEELVSQAAQLGMTSLALTDHGVMYGAIAFYKACKQRGI
KPIIGCEVYFTAGSIREKGTRQEQPIYHLILLAKNEQGYQNLMKLTSIAHLEGFHYKPRI
DLEHLAKYAEGLICLSSCLGSEVSQHLLHNRYDEARQAAERYHAIFGDDYFLEIQDHGMI
EQKKVMASMIELSKETGIPLIATNDVHYVTEPDHVMQDILICIGTGKTVEDTDRLKMGTS
QMYLKSEEEMRRLFVHVPEALTNTAVVASRCNLELTFGKSILPSFRPIPEGMTAGDYLQE
LCRQGLEQRYSSKPEWSEPGSSSLKQQAEERLAYELGVIAKMGFSDYFLIVWDFIRFAHE
KGIMTGPGRGSSAGSLVAYVLRITNVDPLQYKLLFERFLNPERITMPDIDIDFSDERRDE
VIDYVVAKYGHEHVAQIITFGTMAAKAAVRDVGRVLNVPYGDVDRAAKAIPNQLGMTLKE
ALEVSADLKGMVARQPKTAELLDMAMRVEGMPRHASTHAAGVVISREPLTQYVPLQEGTT
QTALTQYTMEHLEAIGLLKMDFLGLRTLSIIERTVDWLEQMEGVHIVFDELEMDTDPLTY
EMLSRGETTGVFQLESTGVRKVLKELKPSEFEDIISVLALYRPGPMEFIPKYIAGKHGLV
EVAYPHATLEPILRDTYGIIVYQEQIMQIASSMAGFSLGEADLLRRAVSKKKREVLDEER
THFVSGSLRQGFTAQEANLVYDMIVRFADYGFPRAHATAYGVLAFQTAYLKAHYPIYFMA
SMLTAVMGNHRKVAEYVDECRRVKLAVLPPDVNGSRTVFTPDPSAGAIRFGLAAIKNVGT
QAIDAILSERKKGPFESLLDFCRRVDLRVCNKRVVESLIQGGAFDSLGGHRAQLLAILDE
TIASATKWRKERDDLQLHLFGFVEEPNWEVEVPNIPPMPQSKQLELEKELLGMYISGHPL
DTYVEALAEIDAVQIHQLTELPDHSDVLVAGMILSNKTIVTKKGDPMAFMELEDRIDKVE
VVLFPETWKKSAPLVGKGRLVLVRGKLQLQDEDPPKLLAEQLAALDDPEAVQRLRRQPAA
RRSPDEVRGRPQRQAAPASGARSAAPTQAAPAGGRPDTTAKPQRVFVKITADCEQPDKLL
QLKALLKLHKGQLAVALFYERGNKLLALSDQYRVDPNKDLIRMIETIMGKDSVRVK
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtttgtccatctgcatgtgcatagtgaatacagcttattagacggtgcggca
cggatggaggagcttgtgtcacaagcggctcagctcggcatgacctctttggctttgacc
gatcatggcgttatgtatggcgcaatcgctttctacaaagcttgcaaacaacgtggcatc
aagccgattatcggctgtgaggtctatttcaccgcaggttcgattcgggaaaaaggaaca
cggcaagagcagccgatttatcatctaattttgctggctaagaatgaacaaggctatcag
aatctcatgaagctcacatctatcgcccatttggagggctttcactataaaccgcgtatc
gaccttgaacatttggcgaagtatgccgaaggactcatttgcttgagttcttgtttgggc
agcgaagtgtcacagcatttgcttcataatcggtacgatgaggcccgccaagcagcggag
cggtatcacgctattttcggagacgattatttcctggaaattcaagatcatggcatgatc
gaacagaagaaagttatggcatccatgatcgagctcagtaaggaaacgggcatcccgttg
atagcgacgaacgatgttcactatgtaacggaacctgaccatgtcatgcaagatatcctg
atttgtattggcacaggcaaaaccgtcgaagatacggatcgactcaaaatgggcacaagt
cagatgtatttgaaaagcgaggaggagatgagacgattatttgtccatgttcctgaggcg
cttacgaacacagctgtggttgcttctcggtgcaatctcgaactgacgttcgggaagtca
attttgccaagcttccgtcctatccctgaggggatgacggcgggtgactatttgcaggag
ctttgtcggcaaggccttgaacagcgttacagctccaagccggaatggagcgaaccaggg
agcagttctctgaaacaacaagcggaagagcgacttgcttatgagcttggtgtgatcgcg
aaaatgggcttctctgattactttctcattgtgtgggatttcatccgattcgctcatgaa
aaaggaatcatgacgggccctggacggggctcatcggcaggaagcttagtcgcatatgta
cttcgtattacgaacgtagatccgttgcaatataagctgctgtttgaacggtttttgaac
ccagaacggatcacgatgcccgatatcgatatcgatttcagcgatgaacgccgggatgaa
gtcattgactatgtcgtggccaaatacggtcatgagcatgtcgcgcaaattattactttc
ggtacgatggcggcgaaagccgctgtacgcgatgtcgggcgcgtgctgaatgttccgtat
ggcgacgttgatcgagcagcgaaggcaattccgaatcaacttggcatgacactgaaggaa
gcgctggaagtaagcgccgatttgaaaggcatggtagccagacaacctaaaaccgcagaa
ctattagatatggcgatgcgcgttgaaggcatgccgcgccatgcgtccacgcatgctgca
ggtgtcgtcatttcacgtgaaccattgacccaatatgtgccgcttcaagaaggcacaacg
cagaccgcgctcacacagtatacaatggagcatctggaggcgatcggtcttcttaaaatg
gacttcctcggcttgcggacgctttcgattattgaacgtaccgtggactggctggagcaa
atggaaggcgtgcacattgtcttcgacgagcttgaaatggacacggaccctttgacctac
gagatgctcagccgaggtgaaacaacgggtgtttttcagttggagtcaacaggcgttcgt
aaagtgctgaaggagctgaaaccctccgaattcgaggatattatctcggtccttgctttg
taccgtccaggtccgatggagtttattcccaagtacattgcaggcaagcatgggcttgtg
gaggttgcttatccgcatgcgactttagaaccgattcttcgggatacgtatgggattatc
gtgtatcaggagcaaattatgcaaattgcttcctccatggcgggattttcactaggagaa
gcggatttattgcgtagagccgtatcaaagaagaagcgggaagtactggatgaggaacga
actcacttcgtctcaggcagcttgcgccaaggcttcacggcgcaggaagcgaacctggtt
tatgatatgattgtccgctttgcggactatggtttcccgcgtgcgcacgcaacggcctac
ggggtgcttgcgttccaaactgcttatctcaaagctcattatccgatttattttatggct
tcaatgttaacggcggtgatgggcaaccaccgtaaggtagccgagtatgtcgacgaatgc
cgacgcgtgaagctcgcggttttaccgccagatgtgaacggaagcagaaccgtgtttaca
cctgatcctagcgcgggagcgattcgtttcggacttgctgcgattaagaatgtgggaacg
caagcgattgatgctattttgagcgagagaaagaaaggacctttcgaaagcctgctggat
ttctgtcgccgtgttgatctgcgtgtgtgtaataaaagagtcgtagaatccctgattcaa
ggaggggctttcgattcgcttggcggccaccgggctcagcttctagccattctggatgaa
acgattgcgtctgcgacgaaatggcgcaaagaacgggacgatttacagcttcatctcttc
gggtttgtcgaggaaccgaactgggaagttgaagtgccgaatatcccgcctatgccgcaa
agcaagcagcttgagcttgagaaggaactgctcgggatgtatatctcaggtcatccactc
gacacctatgtcgaagcattagctgagatcgatgccgtgcagatccatcaattaaccgag
ctgccggatcacagcgatgttctggttgcgggcatgatcctctcgaataagacgatcgtg
accaaaaaaggcgaccccatggccttcatggagctggaggatcgcattgacaaagtcgag
gtggtcttgttccccgagacctggaagaagtcggctccgcttgtggggaagggcaggctc
gttctcgtccgcgggaagctgcagcttcaggacgaggacccgcccaagctgctcgcggag
cagcttgccgcgctggacgacccagaggccgtccagcggcttcgccggcagcctgcggct
agacgatcccctgacgaggtcaggggtcgtccgcagcgccaggctgccccagcgagcggc
gcgcgcagcgccgctccaacgcaggcggcccctgcgggtggccgccctgacacaacggcg
aagccgcagcgcgtcttcgtcaagatcacggctgactgcgagcagccggataagctcttg
cagctgaaggcgctgctgaagctgcataagggacaacttgccgttgcacttttctatgaa
agaggcaacaagctgttagcactgagcgaccagtaccgcgtcgatccgaataaagacctc
atccgcatgattgaaacgatcatgggcaaagattcggtccgggtgaagtga
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