Paenibacillus roseopurpureus: MJB10_20270
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Entry
MJB10_20270 CDS
T10989
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
proo Paenibacillus roseopurpureus
Brite
KEGG Orthology (KO) [BR:
proo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
proo03019
]
MJB10_20270
Messenger RNA biogenesis [BR:
proo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MJB10_20270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WNR43422
UniProt:
A0AA96LLN4
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All DBs
Position
complement(4508976..4509932)
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AA seq
318 aa
AA seq
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MTLIKSLQAPDEFTGFYLIKELEVKQTNTTPAKDFMDIVLCDASGQVSAKMWDVSTADKE
TFFPMTLVKVQGLVQMYRERLQVKIGKIRKAKPEDGVQMTDFIRSAPISPADLIHTIQNV
LASITNADIRSIVSFCVAKVGDKLDHYPAAKTHHHAYFAGLAYHIVRMLEIGEFICKQRP
FLNADLIKAGIILHDIAKPEEMIAQLGIVSDYSVQGKLLGHISMASNWITEAAIHLGLDL
QSDLVLGLQHIVLSHHNLPEWGSPVLPQLPEAVALHYIDSMDAKLQMVEDTLLITPESEP
WTPMIRGLENKAMYRLNI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacattaattaaatctttacaagcacccgatgaatttacggggttttacctcattaaa
gaattggaagttaaacagacgaacacaacgcctgcaaaggatttcatggatatcgtactc
tgcgatgctagcggtcaagtatccgcgaaaatgtgggatgtgagcaccgcggataaggaa
acctttttcccaatgaccttggtcaaggtccagggacttgtccagatgtatcgggaacgc
ttgcaagtgaagatcggcaagatccgcaaagccaagccagaggatggcgttcaaatgacg
gattttatccgttctgctccaattagtcctgctgatctaattcataccattcagaacgtc
ctggctagtattacgaatgccgatattcgctcgatcgtttccttctgtgttgccaaagtc
ggggataaactggatcactatccagcggccaagacgcatcaccacgcgtatttcgcaggg
cttgcctatcatatcgtgcgcatgttggagattggcgaatttatctgcaagcagcgtcct
ttcctgaatgcggacctgattaaagctggcattattttgcatgatattgccaagccagag
gaaatgattgcgcagctcggcattgtttctgactatagcgtgcaagggaagctgctgggt
cacatctccatggcttcgaattggattacagaagccgccatccatctcggattggatctt
caatccgatctcgttcttggcttgcagcatattgtgctctcacaccacaacttgccagag
tggggaagccctgtgctgccgcaactgcctgaagccgtagcactgcattacatcgactcg
atggatgccaagctgcaaatggtcgaggataccttgctgatcacaccagaatccgagcca
tggacaccgatgatccgcgggttggaaaataaagcgatgtaccgcctgaatatataa
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