Propionimicrobium sp. PCR01-08-3: QQ658_00910
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Entry
QQ658_00910 CDS
T09133
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
prop
Propionimicrobium sp. PCR01-08-3
Pathway
prop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQ658_00910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prop03019
]
QQ658_00910
03009 Ribosome biogenesis [BR:
prop03009
]
QQ658_00910
Enzymes [BR:
prop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QQ658_00910
Messenger RNA biogenesis [BR:
prop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QQ658_00910
Ribosome biogenesis [BR:
prop03009
]
Prokaryotic type
rRNA helicases
QQ658_00910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
HEM4
Cas3-like_C_2
DUF7853
Motif
Other DBs
NCBI-ProteinID:
WIY82957
LinkDB
All DBs
Position
complement(191483..193312)
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AA seq
609 aa
AA seq
DB search
MTQDENPTPEPDLTPGFEELGISGPVLSAVRDLGYETPSPIQAATIPPLLAGRDVVGQAQ
TGTGKTAAFALPILERLDFDQKNPQALVLAPTRELALQVCEAFESYAAHMRGVRVLPVYG
GQGYGVQLSALRRGVHVVVGTPGRIMDHLDKGTLDLSQLKYLVLDEADEMLQMGFVEDVE
TILAQTPDDKQSALFSATMPNQIRRLAQKYLDDPQEIMIKSKTATATNIHQRYLVVSYQQ
KVDALTRILEVEDFEGVIVFVRTKNETETVAEKLRARGFSASAINGDIPQAGRERTIGQL
KDGTLDILVATDVAARGLDVDRISHVVNFDIPTDTESYVHRIGRTGRAGRSGEAISFMTP
RERYMLKHIEKATRQQPEQMQLPSLEDVNTTRLARFDDAITTALDETSRIEAFRDIIDHY
VRHHDVPESDVAAALAVVAQGETPLLLDPSNDPLAKANRRQRDDRDDRGGRDRDRGRGER
GDRPGGRRDRGDFTPYRIEVGHHHRVSPGQIVGALANEGGLNRHDFGAITIRPDFSIVEL
PANLDRAVLDRLRDTQIAGQYIEIKPDRFAQNHNKGYRKGGGRDRRGDDRGGYGSGYKGG
KKPYRKPRY
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaagatgaaaaccccacgcccgagcccgatctgacccctggattcgaggaactc
ggcatctccgggcccgttctttcagctgtccgggatctcggctacgagaccccctccccc
attcaggccgcgacgattccgccgctgctggcgggccgcgacgtggtcggccaggcgcag
accggcaccggcaagacggcggctttcgcgctgccaattctggagcgcctcgatttcgat
cagaagaacccgcaggcgctcgtgctcgcccccacccgcgaactggccttgcaggtgtgc
gaggcattcgagtcatatgccgcccacatgcgcggcgtgcgcgtgctgcccgtctacggc
gggcagggctacggcgtccaattgtcggcgctgcgccggggcgtccatgttgtagtaggt
acgcccggacgcatcatggatcaccttgataagggaacgctcgacctgtcgcagttgaag
tacctggtgctcgacgaggccgacgagatgctgcagatgggcttcgtcgaggatgtcgag
acgattctcgcccagactccggacgacaagcagtccgcgctgttctcggcgaccatgccc
aatcagatccggcggctcgcccagaagtatcttgatgatccgcaagagatcatgatcaag
tcgaagacggcgaccgcgaccaatatccaccagcggtatctggtcgtctcgtatcagcag
aaggtggacgcgctcacccgcattctcgaggtggaggatttcgaaggcgtgatcgtcttc
gtccgcaccaagaacgagaccgagacggtggccgagaaactgcgcgcccgcggcttttcg
gcgtccgcgatcaacggcgacattccgcaggccggacgcgaacggacgatcggtcaactc
aaggacggcaccctcgacatcttggtggccaccgatgtcgcggcccgcgggctggatgtc
gaccgcatcagtcacgtcgtcaacttcgacattccgaccgacaccgagtcgtacgtgcac
cgcatcggacgcaccgggcgggccgggcgcagcggcgaggcgatcagcttcatgaccccg
cgcgagcgctacatgctcaagcacatcgagaaggcgacccgccagcagcccgagcagatg
caactgccgagtctcgaagacgtgaacaccacccggctggcgcgtttcgatgatgcgatc
accacggcgctggacgagacctcgcgcatcgaggccttccgcgacatcatcgaccactac
gtgcgccaccacgatgtgcccgaatccgatgtggcggcggcgctggcggtggttgctcag
ggtgagaccccgttgctgctggatccgagcaatgatccgttggccaaggccaatcgtagg
cagcgcgatgaccgggacgaccgcggtggacgcgaccgtgatcgtggccgaggcgagcgg
ggcgatcgcccgggtggccgccgtgaccgcggcgatttcactccgtaccgcatcgaggtc
ggacatcaccaccgggtgagcccgggccagatcgtcggtgcgctggcgaacgagggtggg
ctgaatcgtcacgatttcggtgcgatcaccattcgtccggacttctcgatcgtggagcta
cctgccaatctggaccgcgcggtgctcgaccggctgcgcgacactcagatcgccggccag
tacatcgagatcaagcccgaccgcttcgcccagaaccacaacaagggctatcgcaagggt
ggtggacgcgaccgccgcggcgatgatcgtggtggctacggcagcggttataagggtggc
aagaagccctaccgcaagccgcgctactga
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