Propionimicrobium sp. PCR01-08-3: QQ658_02055
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Entry
QQ658_02055 CDS
T09133
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
prop
Propionimicrobium sp. PCR01-08-3
Pathway
prop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QQ658_02055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prop03021
]
QQ658_02055
03400 DNA repair and recombination proteins [BR:
prop03400
]
QQ658_02055
Enzymes [BR:
prop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QQ658_02055
Transcription machinery [BR:
prop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QQ658_02055
DNA repair and recombination proteins [BR:
prop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QQ658_02055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF5700
Motif
Other DBs
NCBI-ProteinID:
WIY83165
LinkDB
All DBs
Position
431332..435222
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDANTYDQLRIGLATADEIREWSYGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIVCERCGVEVTRSNVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMITRVDEDARHRDLPSLEAKVGVEHTQIEKRRDSDIEARSMKLEED
LAALESEGAEKDTRKKVRDAAEKEMKHLRDRAQRELDRLDAVWTRFKSLKVQDLEGDEVL
YREMKNRFGRYFEGYMGAEAIQKRLESFDLAAEAESLRDVIKTGKGQRKTRALKRLKVVR
AFLDTGNSPLGMVLNAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKIHQCGLPKNMALELFKPFVMKRLAEQNYAQNIKSAKRMVDRQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSTEAQAEARILMLSSNNILKPADGKPVALPSHEMIIGMYYLTQNLDGLPGEGR
VFSSIDEAVMAYDLHEIDIRSKIKVRVHDITPPARLADQVHADGSLLMDTTLGKIIFNQT
MPDSYPFVESHVGKKQLGAIVNDLAEHYPKTVVTEVLDNLKDMGFKWGTRSGVTVSIGDV
QTPPNKPEIMAGYDAKAAKIDKLYERGAVTEEERREELIRIWTDATAELTNAMEANFTQT
NPIYMMVNSGARGNMTQMRQIAAMRGLVANPKGEIIARPIKSNFREGLTVLEYFISTHGG
RKGQADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLTKTIATADEAGALRPVKAL
DTSVYGRSLAVDAVSESGEVVVPAGTDLGEVEISAMIAAGIDTCKVRSVLTCDAASGTCA
MCYGRSLAGGKLVDVGEAVGIQAAQSIGEPGTQLTMRTFHTGGVAGDDITLGLPRVVELF
EARTPKGKAPIAEADGRVKIEDGDRGRKLVIVRDDGQADVEYVVPRRARLEFDDHNGVHK
VVSDGDHVNIGDQLTAGTIDPQDVLRVQGVRKVQEHLVAEVQKVYATQGAPIHDKHIEII
IRQMLRRVTVIDSGDTDMMPGDLFDRQTYEQANRKALTEGGRPAEGRPVLMGITKASLAT
DSWLSAASFQETTKVLTDAAINGKSDHLIGLKENVILGKLIPAGTGLERYRNIRVEPTAD
ARANAYTLSYDAFDYDFGSGTGAAVPLDDMDYRDLR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
gtgctggatgccaatacctatgaccagctgcgcatcgggctggcgactgcggacgagatc
cgcgagtggagctacggcgaggtcaagaagccggagaccatcaactaccggacgctgaag
cctgagcgcgacggactgttctgcgagaagatcttcgggccgacccgcgactgggaatgc
tactgcggcaagtacaagcgtgtccgtttcaagggcatcgtgtgtgagcgctgcggcgtc
gaggtgacccgctcgaacgtgcgccgtgagcgcatggggcacatcgaactggccgccccg
gtcacccatatctggtatttcaagggtgtgccgagccggctcggctacctgctggacatt
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacccgggtggac
gaagacgcccggcaccgcgacctgccgagcctggaggccaaggtcggggtggagcacacc
cagatcgagaagcgccgcgattccgacatcgaggcccgctcgatgaagctggaagaagac
ctcgccgcgctcgaatccgaaggtgccgagaaggacacccgcaagaaggtgcgcgacgcc
gccgagaaagagatgaagcatctgcgtgaccgtgcgcagcgcgagctcgatcgtctcgat
gccgtctggacgcgcttcaagtcgctcaaggtgcaagacctcgagggcgacgaggtgctc
taccgtgagatgaagaaccgcttcggccgttacttcgagggctacatgggagccgaggcg
atccagaagcgtctggagagcttcgacctggccgccgaggcagagtcgctgcgcgacgtc
atcaagaccggcaaggggcagcgcaagacccgcgcgctcaagcgcctcaaggtcgtccgc
gccttcctcgacaccggcaattcgccgctcggcatggtgctgaacgccgtcccggtgatc
ccgcccgacctgcgcccgatggtgcagctggacggcggccggttcgcgaccagcgacctg
aatgacctgtaccgccgcgtgatcaaccgcaacaaccgtctgaagcgcctcttggatctc
ggcgcgcccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgttgactcg
ctgttcgacaacggacgccgcgggcgtccggtcaccgggccgggcaaccgtccgctgaag
tcgatcagtgacatgctgaagggcaagcagggccggttccgccagaacctgctgggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgcagctgaagatccatcag
tgcggcctgccgaagaacatggccctcgaactgttcaagccgttcgtgatgaagcggctc
gccgagcagaactacgcccagaacatcaagagcgccaagcggatggtcgaccgtcagcgc
ccgcaggtgtgggacgttctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcaccaactctgcaccggttgggcatccaggcgttcgagccgcagctcatcgagggcaag
gccattcagctgcacccgctggtttgtgcagcattcaacgccgacttcgacggcgaccag
atggccgtccatctgccgctttccaccgaggctcaggccgaggcccgcatcctgatgctg
tcgagcaacaacatcttgaagccggcagacggcaagcccgtcgcgctgcccagccacgag
atgatcatcggcatgtactacctgacccagaacctcgacggtctgccgggtgagggacgg
gtcttcagctcgatcgacgaggccgtgatggcctacgacctgcacgagatcgacattcgg
tcgaagatcaaggtgcgcgtccacgacatcaccccgcccgccaggctggccgaccaggtg
cacgccgacggctcgctgctgatggacaccaccttgggcaagatcatcttcaaccagacg
atgcccgacagctacccgttcgttgagtcccacgtcggtaagaagcagctgggtgcgatc
gtcaacgacctggccgagcattacccgaagaccgtggtcaccgaggtgctcgacaacctg
aaggacatgggcttcaagtggggcacccgctcgggtgtcacggtgtcgatcggcgatgtg
cagacgccgccgaacaagccggagatcatggccggatacgacgccaaggccgcgaagatc
gacaagctctacgagcgtggtgcggtcaccgaggaggagcgccgtgaggagctcatccgc
atttggaccgatgcgaccgccgagttgaccaatgcgatggaggccaactttacgcagacc
aacccgatctacatgatggtgaactcgggggcacgaggcaatatgacgcagatgcgtcag
atcgcagcaatgcgtggcctggtggccaacccgaagggcgagatcatcgcgcgtccgatt
aagtcgaacttccgcgagggcctgaccgtgttggagtacttcatctccactcacggtggc
cgtaagggacaggccgacaccgcactgcgtaccgcagactccggttacctgacccgccgg
ttggtcgacgtctcacaggacgtcatcatccgcgaggaggattgcggtaccgagcgtggc
ctgaccaagaccatcgcgaccgcggacgaggccggcgcgctgcgtccggtcaaggcgctc
gacaccagcgtctacggacgtagcctcgcggtggacgccgtcagcgaatccggtgaggtc
gtggtgcctgcgggtaccgacctcggcgaggtcgagatctccgcgatgatcgccgccggt
atcgacacctgcaaggtgcgttcggtgctcacctgtgatgctgcttccggcacctgcgcg
atgtgctacggacgctcgctggccggcggcaagctggtcgatgtcggcgaggcggtcggt
attcaggccgcgcagtcgatcggtgagcccggcacccagctgacgatgcgtaccttccac
accggtggtgtggcgggcgacgacatcacgttgggtctgccccgcgtggtcgagcttttc
gaggctcgtaccccgaagggcaaggcgccgatcgccgaggccgatggccgcgtcaagatc
gaggacggggaccgtggccgcaagctggtcatcgtccgcgacgacggccaggccgatgtc
gagtacgtggtgccgcgtcgtgcccggttggagttcgacgaccataacggtgtgcacaag
gtggtttccgacggagaccatgtcaacatcggcgatcagctgactgccggcacgatcgat
ccgcaagacgtgctgcgcgtccagggcgtgcgcaaggtgcaggagcacctagtggccgag
gtgcagaaggtctatgcgactcagggtgccccgatccacgacaagcacatcgagatcatc
atccgccagatgctgcgccgggtgacggtcatcgactcgggcgacaccgacatgatgccc
ggcgacctgttcgaccgtcagacctacgagcaggccaaccgcaaggcgctcaccgagggt
ggacgcccggccgaggggcgtccggtgttgatgggcatcaccaaggcctcgctggcaacc
gattcgtggctgtcggcggcgtccttccaggagaccaccaaggtgctcaccgatgctgcg
atcaacggcaagtccgatcacctgatcggtctgaaggagaacgtcatcctcggcaagctg
atcccggccggcaccggtctggagcgttaccgcaacatccgggtcgagccgaccgcggat
gccagggcgaacgcgtacacgctcagctacgacgccttcgactacgacttcgggtcgggc
accggagctgcggtgccgctggacgacatggattaccgcgatctgcggtga
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