Propionimicrobium sp. PCR01-08-3: QQ658_02600
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Entry
QQ658_02600 CDS
T09133
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prop
Propionimicrobium sp. PCR01-08-3
Pathway
prop03420
Nucleotide excision repair
prop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QQ658_02600
03430 Mismatch repair
QQ658_02600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prop03400
]
QQ658_02600
Enzymes [BR:
prop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QQ658_02600
DNA repair and recombination proteins [BR:
prop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QQ658_02600
MMR (mismatch excision repair)
Other MMR factors
QQ658_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WIY83269
LinkDB
All DBs
Position
531978..534344
Genome browser
AA seq
788 aa
AA seq
DB search
MTQPDLLDGLNPPQREAVIHAGSPVLVVAGAGSGKTRVLTRRIAHLVSERDVHPGSILAI
TFTNKAAAEMRSRVIDLVGNRARLMWVSTFHSACVRILRSEIDAMGFRKTFSIYDDTDAK
RLMTLVARDQNLDPKKFPPRGLLNWVSNCKNELITPAQAQAKASGLDEVRAEAYKVYNER
LRSANALDFDDLIMTTVLLFEQHPEIREAYRRRFRQVLVDEYQDTNHAQYLLIKQLCGDL
GTDDGLPDGAPRIDPGELMVVGDSDQSIYAFRGATIRNILDFEDDFPGARTILLEQNYRS
TQTVLSAANAVIRHNSGRPEKRLWSDAGDGDKIVGYVADTEHDEARFVANEIDSLVDKGQ
GKYSDMAVFYRTNAQSRAFEEVFIRLGLPYRVVGGVRFYERREIRDALAYLRAISNPSDD
VSLRRIINVPKRGIGERAEVSLAMLAANEQISFAEAIDRAEEAPGMATRSLNQVKSFSQM
MADFRAMVAAGLPASEILEAVLKRSGMIDELRNSSDPQDETRVENLVELVKVAQEFVALA
TTQELVAGDEADYEVTAPSDTELADELAAAQPEPDASLGAFLERVALVADSDQIPNATDD
AGVVTLMTLHTAKGLEFDTVFLTGMEDGIFPHMRAMTDSAELAEERRLAYVGITRARKKL
YLSRSVVRTIFGKPAYNPESRFLAEIPEELIDWRRKVSEVASWASTAADRSAQARSVLAS
GTAFGSGRGPVKKTLPTVNTGDRVLHAAFGMGTVVATSGAGDNARADVDFGSGGVKRFVL
KYAPLEKL
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaccagatctgctcgacggcttgaacccaccccagcgcgaagccgtcatccac
gccggcagccccgtcttggtggtcgccggcgccggatctggcaagacccgcgtgctgacc
cgacgcatcgcacacctggtgtccgagcgcgacgtgcatccgggatcgatcctcgccatc
accttcaccaacaaggccgcggcggagatgcgctcacgcgtcatcgatctggtcggcaac
cgggcccggctgatgtgggtgtcgacctttcactcggcgtgtgtgcgcatcctgcgctcc
gagatcgacgcgatgggcttccgcaagaccttctcgatctacgacgacaccgacgccaaa
cggctgatgaccctggtcgcccgcgaccagaacctcgacccgaagaagttcccgcccaga
ggcctgctgaactgggtgagcaactgcaagaacgagctgatcacccccgcccaggcccag
gcgaaggcgtccgggctcgacgaggtgcgcgccgaggcctacaaggtctacaacgaacgg
ctgcgttcggccaatgctctcgacttcgatgacctgatcatgacgaccgtgttgctgttc
gagcagcatcccgagatccgcgaggcctaccggcgcaggttccgacaggtgctggtcgac
gaataccaagacaccaaccacgcgcaatatctgctgatcaagcaactgtgcggcgatctc
ggcaccgacgatgggctgccggacggtgcgccgcgtatcgatcccggtgagctgatggtg
gtcggcgattccgatcagtcgatctatgccttccgcggggcgacgatccgcaacatcctc
gatttcgaggacgacttccccggcgcccggactattctgctggagcagaactatcgctcc
acccaaaccgtgttgtctgctgcgaacgcggtgatcaggcataactcgggtcgtcccgaa
aagcggctgtggagcgatgccggggacggcgacaagatcgtcggctatgtggccgacacc
gaacacgatgaggcccggttcgtcgctaatgagatcgactcattagtggacaagggccag
ggcaaatactccgacatggcggtcttctaccgcacgaacgcccagtcgagggccttcgaa
gaggtgttcatcaggctgggcctgccctatcgggtggtcggtggcgtccggttctatgag
cggcgcgagatcagggacgcgctggcctatctgcgggcgatctcaaaccccagcgatgac
gtctcgctgcgccgcatcatcaacgtgccgaagcggggtatcggggagcgtgctgaggtg
tcgctggcgatgctggccgccaacgagcagatcagcttcgccgaggccatcgatcgtgcc
gaggaagcgcccgggatggcgacccgctcgctcaaccaggtgaagtccttctcccagatg
atggccgatttccgggcgatggttgctgcgggcctgcctgccagcgagatcctggaagcg
gtgctcaagcgctccggaatgatcgacgagctgcgcaattcctccgacccgcaagacgag
acccgtgtcgagaacctcgtcgagctggtcaaggttgcccaggagttcgtggcgctcgcc
accacccaggaactcgttgccggggacgaggccgactacgaggtgaccgcgccgtccgac
accgaactggcggacgagctggccgccgcccagcccgaacccgatgcgtccttgggagca
ttcctggagcgagtggctttggtggcggactccgaccagattccgaacgccaccgacgat
gccggtgtcgtgaccttgatgaccttgcacaccgcgaagggcttggagttcgacacggtc
tttctgaccggaatggaggacggcatcttcccgcacatgcgggcgatgaccgattccgcc
gaactcgccgaagaacgccggctcgcctacgtcggtatcacccgcgcccgcaagaagctg
tacctcagccgctcggtggtgcgcaccatcttcggaaaaccggcctacaacccggaaagc
cgtttcctcgccgagatccccgaagaactcatcgactggcggcgcaaggtctccgaggtt
gcgagttgggcgtccaccgcggccgaccggtcggcccaggccagatcggtgctggcatcg
ggaacggccttcggatcgggacgcggcccggtcaagaaaactctgcccacagtgaacacc
ggcgaccgggtgctgcacgccgccttcggcatgggaacggtggtggccaccagcggggca
ggagacaacgcccgcgccgacgtcgatttcggctccggcggggtgaagcgtttcgtgctg
aagtacgcgccgctggagaaactctga
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