Propionimicrobium sp. PCR01-08-3: QQ658_08780
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Entry
QQ658_08780 CDS
T09133
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
prop
Propionimicrobium sp. PCR01-08-3
Pathway
prop03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QQ658_08780 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prop03400
]
QQ658_08780 (uvrA)
DNA repair and recombination proteins [BR:
prop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QQ658_08780 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QQ658_08780 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
AAA_22
DnaJ_CXXCXGXG
APS_kinase
ATPase
ExoX-like_C
HTH_20
HTH_5
DUF2116
IIGP
DUF87
Motif
Other DBs
NCBI-ProteinID:
WIY84226
LinkDB
All DBs
Position
complement(1907652..1910666)
Genome browser
AA seq
1004 aa
AA seq
DB search
MNSVKDRLVISGAREHNLHNVSLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVES
LSAYARQFLGQMDKPQVDFIEGLSPAVAIDQKSTSRNPRSTVGTVTEIYDYLRLLFARVG
HPHCLVCGAPISKQTPQQIVDQVLGQPEGTRFQVLAPVVRGRKGEYGELFRNLTTQGYAR
VRVDNETYRLAEVPALDKQRKHDIDVVIDRVAVKPSAKQRITDSVETALELASGLVILDF
VDRDEDDPARRRSYSEKLACPNGHDISLDEMEPRQFSFNSPWGACPECTGLGTTLEVDPD
LVVPDQLKSLAQGAIAPWASPMVAAHYSHVFESMAEKYGFSVDTPWEDLKPSVRKYILQG
ADDPVLVRYRNRFGRVRTYSQKYEGVLPQVRRRYDEAETDAARDRWGAYLREIPCASCHG
ARLKPATLAVTIAGKNIDEVSRLSVDQLADFLGKLELGEREKAIAGQVLKEINQRLRFLL
DVGLDYLTLARSAGSLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRLIETL
LRLRDLGNTLIVVEHDEDTIRSADHVVDIGPGAGEHGGGVVVSGSVDDLLASKESLTGAY
LAGRRSIALPEVRRLGNGDELVVHRASENNLKDVTVTFPLGRFIAVTGVSGSGKSSLVNT
ILYRSLAKQLYGSKDVPGRHKGITGAEDVNKVVHVDQSPIGRSPRSNPATYTGVFDKVRT
LFSQTPEAKARGYRPGRFSFNVKGGRCENCMGDGTIRIEMNFLPDVYVPCEVCHGARYNR
ETLEVRYKGKTIAEVLDMPIEEAAEFFAPISAISRHLKTLVEVGLGYVRLGQPATTLSGG
EAQRVKLASELQRRSTGNTVYVLDEPTTGLHFEDIRKLLDVLNRLVDGGNTVVVIEHNLD
VIKTADWVIDMGPEGGFRGGQVIATGTPEDIAQCRQSYTGQFLAEILNGHEVPLATPAPQ
PLIAAEPAPKKKRTRKPADAKQASKPRSTPTRTKRAPARKTSAA
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcgtgaaagatcgactcgtcatctcgggtgcccgggagcataacctgcataac
gtctcgttggacctgccacgagacgcgatgatcgtgttcaccgggttgtcgggctccggc
aagtcatcgctggctttcgacacgatcttcgccgaaggtcagcgacgttatgtcgagtcg
ttgtcggcctatgcccggcaattcttgggccagatggacaagcctcaggtcgacttcatc
gaaggcctgtcgcctgcggtcgccatcgaccagaagtccaccagccgcaacccgcgttcg
acagttggcacggtcaccgagatctatgactatctgcggttgctgttcgccagggtgggg
cacccgcactgtctggtctgcggggcgccgatctcgaagcaaaccccgcagcagatcgtc
gaccaggtgctcggccagcccgagggcacccgtttccaggtgctggctccggtcgtccgt
ggacgcaagggcgagtacggcgaactcttccgcaacctcaccacgcagggctacgcgcgg
gtgcgcgtcgacaacgaaacataccggctcgccgaggtgccggcgctcgacaagcagcgc
aaacacgatatcgatgtggtgatcgaccgggtcgccgtgaagccatcggcgaagcagcgc
atcaccgactcggtggagaccgcgctcgagctggcgtccggcctggtcatcctcgatttc
gtcgatcgtgatgaggacgatccggcgcgccgccgcagctactccgagaagctcgcctgc
ccgaacgggcatgacatctcgctggacgaaatggagccgcggcagttctccttcaacagt
ccgtggggcgcctgccccgaatgcaccggcctgggcaccaccttggaggtcgatcccgat
ctggtcgtcccggatcagttgaagagcctggcacagggggctatcgcgccgtgggccagc
ccgatggtggcggcgcactactcgcatgtcttcgagtcgatggcggagaagtacggcttc
tcggtcgatacgccctgggaggacctgaagccttcggtccgtaaatacattctgcaaggt
gccgacgatccggtgctggtgcggtatcgcaaccgcttcggcagggtgcgcacctacagc
cagaagtatgaaggtgtgcttccccaggtgcggcgccgctacgacgaggccgagacggac
gcggccagagaccgctggggagcttacctgcgggagattccctgcgcgagctgccatggt
gccaggctcaagccggcgacgctcgcggtgacaatagccggcaagaatatcgacgaggtg
tcccggctgtcggtggatcaactggcggatttcctgggcaagctcgaactcggcgaacgc
gagaaggccatcgccgggcaggtgctcaaagagatcaaccagcgactgcgattcctgctc
gatgtgggcctcgactacttgaccctggcgcgcagcgccggatcgctgtcgggcggcgag
gcacaacgcatccggctggccacccagatcggctcgggactcaccggagtgctctacgtt
ttggacgagccgtccatcggtttgcatcagcgcgacaaccgccgcctgatcgagacgctg
ctcaggctacgagatctgggcaacaccctgatcgtcgtggagcatgacgaggacaccatc
cgttcggccgaccatgtcgtcgacatcggcccgggggcaggcgaacacggcggcggggtg
gtggtgagcggctcggtcgacgatctgctcgccagcaaggaatcgctgaccggcgcctat
ctggccggcagacgatcgatcgccttgcccgaggtgcgcaggcttggcaacggtgatgaa
ctggtggtgcaccgggcgagcgagaacaacctgaaggacgtcactgtcacgtttccgctg
ggccggttcatcgcggtgaccggcgtctccgggtcgggcaaatcgtcgctggtgaacacg
atcctgtaccgctcgctggccaaacaactgtacggctccaaggatgtgcccggccggcac
aagggcatcaccggcgccgaggacgtcaacaaggtggtgcatgtcgatcaatcaccgatc
ggtcgttcgccccggtccaacccggcgacctacaccggggtgttcgacaaggtccgcacg
ctgttcagccagacccccgaagcgaaggcgcgcggctaccgtccggggcgcttcagcttc
aacgtcaaaggcggacgctgcgagaactgcatgggtgacggcaccatccggatcgagatg
aacttcctgccggatgtctacgtgccctgcgaggtgtgccacggcgcccgctacaacaga
gaaaccctggaggtgcggtacaagggcaagaccatcgccgaggtgctcgatatgccgatc
gaggaggcggccgagttcttcgcgccgatctcggcgatctcgaggcatctgaagacgctg
gtcgaggtcgggctcgggtacgtgcggctcggtcagccggccacgacgctgtcgggcggc
gaagcccagcgggtgaagctggcgtccgagttgcagcgccggtccaccggcaataccgtc
tacgtgctcgacgaacccaccacaggtctgcatttcgaagacatccgcaagctactcgac
gtgctcaatcggctggtcgacggtggcaacaccgtggtggtgatcgagcacaacctcgac
gtcatcaagaccgccgactgggtgatcgatatgggtcccgaagggggtttccggggcggc
caggtgatcgccacgggtaccccagaagacatcgcgcagtgccggcagtcatataccggc
caattcctggcggagatcctgaacggtcacgaggtgccactcgccaccccggcgccccaa
ccgctgatcgctgccgaaccggcgcccaagaagaagcggacgcgcaaacctgccgacgcg
aaacaggcgagcaagccgcgcagtaccccgaccaggacgaagcgggcacccgcccgcaag
acgtccgcagcctga
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