Propionimicrobium sp. PCR01-08-3: QQ658_08830
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Entry
QQ658_08830 CDS
T09133
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
prop
Propionimicrobium sp. PCR01-08-3
Pathway
prop03030
DNA replication
prop03410
Base excision repair
prop03420
Nucleotide excision repair
prop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QQ658_08830 (polA)
03410 Base excision repair
QQ658_08830 (polA)
03420 Nucleotide excision repair
QQ658_08830 (polA)
03440 Homologous recombination
QQ658_08830 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prop03032
]
QQ658_08830 (polA)
03400 DNA repair and recombination proteins [BR:
prop03400
]
QQ658_08830 (polA)
Enzymes [BR:
prop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QQ658_08830 (polA)
DNA replication proteins [BR:
prop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QQ658_08830 (polA)
DNA repair and recombination proteins [BR:
prop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QQ658_08830 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QQ658_08830 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WIY84227
LinkDB
All DBs
Position
complement(1921495..1924164)
Genome browser
AA seq
889 aa
AA seq
DB search
MLIDGHSMAYRAYYALPVENFATASGQHTNAVFGFTSMLINILRDERPTHVAVAFDVSRV
TFRTAEYQDYKATRSKSPDEFKGQVALISEVLDALKIPHLSVDDYEADDIIATLSAQADA
RGWENIIVTGDRDSFQLVDGNTTVLYPVRGVSELARMTPDAIETKYGVVPARYPEVAALV
GETSDNLPGVPGVGNKTAAKWLAKFDGLDNLLARADQVPGKAGDSFRAHIDDVRRNRRLN
RLVNDLALDLGLDDLELHGWDRDAVHQLFDALEFRVLRDRLIEAFPDDEHADEQQGFEFT
GERLGPGALAGWITEHGQGELTGVDFTGHWGSGRGDIAAVALASTDGSACWFDVADLDAP
DEQAFAHWLADPGFGKAMHSAKGPMLAAWEQGWQLNGLICDTELAAYLLRPDQRSYDLAD
MSIRYLKRELRANSSGQEATDQQMLDFGSETTDEESDAAMLRARAVVDLTDAMSVELGRL
GQRRLLDDLELPLQRILARMERTGIALDGEVLDQLHSEFDARVRSAEQAAWDSVGRQVNL
GSPKQLQAVLFDQLDLPRTKKIKSGYTTDAEALEGLYVRTEHPFLEHLLAHRDSIKLRQA
VDGLRKSVTDDGRVHTTYLQTIAATGRLSSADPNLQNIPIRTEEGRRIRSAFCVGEGYEA
LMSADYSQIEMRVMADASGDEDLIEAFRSGVDFHTVTASKVFGVPAEQITGAQRASVKQM
NYGLAYGLSAYGLSTRLGVPVPEARALMDDYFTTFGGVRDYLGEVVAQARRTGYTETLAG
RRRYLPDLNSSNRQRREMAERMALNAPIQGSAADIIKIAMIGLDQALISAGLKSRVLLQI
HDELVLEVASGEHDQVTTLVREQMAGAANLMVPLDVSIGYGPTWLDAAH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgacggtcattccatggcctaccgcgcctactacgccctgcccgtggagaat
ttcgcgaccgcttcgggacagcacaccaacgccgtcttcgggttcacgtcgatgctcatc
aacatcttgcgggacgaacgcccgacgcacgtggccgtcgcgttcgacgtgtcccgtgtc
accttccgcaccgcggaataccaggactacaaggcgaccaggtcgaagagcccggacgag
ttcaagggccaggtcgcgctgatctccgaagtgctggacgcactgaagattccgcacttg
tcggtggacgactacgaggccgacgacatcatcgccacgctcagcgcacaggcggacgcc
cgcggctgggagaacatcatcgtcaccggcgaccgcgactccttccaactggtcgacggc
aacaccaccgtgttgtatccggtccgcggagtcagcgaactggccagaatgacccccgac
gcgatcgagacgaaatatggtgtcgtcccggcgcgctacccggaggtcgccgcgctggtc
ggcgagaccagcgacaatctgccgggagtgcccggggtcggcaacaagaccgccgcgaag
tggctcgccaagttcgacggtctggacaacctgctggcccgcgccgatcaggtgccgggc
aaggccggtgattcgttccgggcccacatcgacgacgtgcgccgcaaccgcaggctgaac
cggctggtcaacgacctcgccctcgatttggggctggacgatctggagctgcacggctgg
gatcgtgacgctgtgcaccagctcttcgatgcactcgagttccgggtattgcgcgaccgg
ctgatcgaggccttcccggacgacgaacacgccgacgaacagcaaggtttcgagttcacc
ggcgagcggttggggccgggagcgctcgccggatggataaccgagcacgggcagggtgaa
ttgaccggtgtcgacttcaccggtcattgggggtcgggccgcggcgatatcgcggcggtg
gcgctggcgagcaccgatggctcggcttgctggttcgatgtggccgatctcgatgctccc
gacgagcaggctttcgctcactggctcgcagaccccggtttcggcaaggcgatgcactcg
gcgaagggtccgatgctggcggcctgggaacagggctggcaactgaacgggctgatctgc
gacaccgaactggctgcgtatctgcttcgccccgatcagcgcagctacgacctggcggat
atgtcgatcagatacctcaagcgggaactgcgcgcgaattcctcgggtcaagaagccacc
gaccagcagatgctcgatttcggcagcgaaaccaccgacgaggaatccgatgcggcgatg
ctgcgggcccgcgccgtcgtcgacctgaccgatgccatgtcggtcgagctcggacggctc
ggccagcgccggctgctggacgacctcgaactgccgttgcagcggattctggcccggatg
gagcgcaccggcatcgcactcgatggtgaggtgctcgatcaactgcactccgaattcgat
gccagggtgcggtcagccgagcaggccgcgtgggacagcgtgggccgccaggtcaatctc
ggctcgcccaagcagctacaggcggtcttgttcgaccagctggatctgccgcggaccaag
aagatcaagtcgggttacaccaccgatgcggaggccctggaggggctctatgtccgcacc
gagcatcccttcctggagcatctgctcgcgcatcgcgactccatcaaattgcggcaggcg
gttgacggattgcgtaagtcggtgaccgacgacggccgcgtccacaccacctatttgcag
accatcgccgcgaccggacgcctgagttcggccgatccgaacctgcagaacattccgatc
cgtaccgaggagggccgccggatccgttccgcgttctgtgtcggcgagggatatgaggcc
ctgatgagcgccgattactcgcagatcgagatgcgggtgatggccgatgcctcgggtgat
gaagacctgatcgaggcgttccgcagcggggtcgatttccacaccgtgaccgcgtccaag
gtcttcggtgtaccggccgaacagatcaccggcgcccagcgggccagcgtgaagcagatg
aattacgggctcgcctacgggctgtcggcctacggcttgtcgacccggctgggtgtgccg
gtgcccgaggcacgcgcgctgatggacgattacttcaccaccttcggtggcgttcgtgac
tatcttggcgaggtcgtggcgcaggcccgccgcaccggctacaccgaaaccttggccggt
cgtcgccgctatctgcccgacctgaattcgtccaaccggcaacgccgcgagatggccgaa
cggatggcgctcaacgcaccgattcagggatcggccgctgacatcatcaagatcgccatg
atcgggctcgatcaggcattgatctcggctggcctgaagtcacgggtgctgttgcagatc
catgatgagctggtgctcgaggtggcgtccggcgagcacgatcaggtcactacattggtg
cgcgagcagatggccggtgcggcaaacctgatggtgccgctcgatgtgtcgatcggctac
ggtccgacctggctggacgccgcgcactga
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