Propionimicrobium sp. PCR01-08-3: QQ658_09085
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Entry
QQ658_09085 CDS
T09133
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
prop
Propionimicrobium sp. PCR01-08-3
Pathway
prop03030
DNA replication
prop03430
Mismatch repair
prop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QQ658_09085
03430 Mismatch repair
QQ658_09085
03440 Homologous recombination
QQ658_09085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prop03032
]
QQ658_09085
03400 DNA repair and recombination proteins [BR:
prop03400
]
QQ658_09085
Enzymes [BR:
prop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QQ658_09085
DNA replication proteins [BR:
prop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QQ658_09085
DNA repair and recombination proteins [BR:
prop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QQ658_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
RNase_H_2
LHD_TRPY1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WIY81678
LinkDB
All DBs
Position
1981060..1982799
Genome browser
AA seq
579 aa
AA seq
DB search
MAIDRHQNLLQPSLDDIGTPLSEATFCVVDLETTGSGPEATITEFGAVKVRGGQILGEFG
TLVNPGVHIPGFIAVLTGITNQMVTSQPTLGEVLPSWLEFSRGTVLVAHNARFDIGFLKR
ACEQFGYPWPGNMVVDTVALARQALLRGEVPNVKLHTLADHFHAATQPNHRALSDARATV
DVLHGLLERVGNLGVLSLEDLKEFEHRVSPQRRAKRTWASELPERPGVYTFYAQRPGQDR
QVLYVGKASNIRRRVRTYFTSSETRPRMDEMVRIATGVDAVVCATELEAQVRELRTIAAH
APRYNRRSKRQDKVAWVKLTCERYPRLSVVAKPADDQATYWGPFSSRSAAQTGCEAIYDA
YPLRQCTTKIAKNASGPACALAELGKCLAPCLGSAADDYAELTKQVREAMTGDLRPTLAL
IGRRIVRLSEQQRYEQAEVLTTRLRSYVAASQRLHRLQAISRCSQIVAAQWIASPAPNPG
WQIHVIRYGKLAAAACAAPGSDPIEVANRAVQLAEVVWATPHDMPSASVEEAELIARWLE
TPGVRLIDIDGEWSMPVHGGVDRADLPELTVGAGARDNL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgatcgacaccagaacctgctgcagcccagcctggacgacatcggtaccccg
ctgtcagaggccacgttctgtgtcgtcgatctggagaccaccgggtcggggccggaggcg
acgatcaccgaattcggtgccgtcaaggtgcgcggcggtcagattctcggcgaattcggc
actctggtcaacccgggcgtccacatacccggattcatcgccgtgctcaccggcatcacc
aaccagatggtcacctcgcagccgacgctcggcgaggtgctgccgagctggctggagttc
tcgcgtggcaccgtgctggtggcacacaacgcccgcttcgatatcggtttcctcaaacgt
gcctgcgaacaattcgggtatccgtggcccgggaatatggtcgtcgacaccgtcgcgctg
gcccgtcaggcgctgctgcgcggcgaagtgcccaacgtcaaactgcacaccctggccgac
cattttcatgccgccacccaacccaatcaccgcgcgctgtccgacgcacgcgccaccgtc
gatgtgctgcacggattgctggagcgggtcggcaacctcggagtgctgagcctcgaggat
ctcaaggaattcgagcatcgcgtttcaccgcaacgccgggccaaacgcacctgggcctcc
gagctgcccgagcggcccggcgtctacaccttctatgcgcagcgcccgggccaggatcgt
caggtgctgtatgtgggcaaggcgagcaatatccgccgccgggtgcgcacctatttcacc
tcgtcggagaccaggccgcggatggacgagatggtgcgcatcgccaccggggtggacgcc
gtggtctgcgcgaccgagttggaggcccaggtgcgggagctgcgtaccatcgcggctcat
gcgcctcgctataaccgtcgttcgaagcggcaggacaaggttgcctgggtgaaactcacc
tgcgagcgctatccccgcctttctgtggtggccaaaccggcggacgaccaagcaacctat
tggggcccgttcagttcgagatccgccgcgcaaaccggatgcgaggccatctatgacgcc
tatccgctgcgccagtgcaccacgaagatcgccaagaacgccagcggccccgcctgcgcg
ctcgccgaactcggcaaatgcctggccccatgcctggggtcggcagcagatgactacgcg
gagttgaccaagcaggtgcgcgaggcgatgaccggtgacctgcggcccaccctggcgctg
atcggacgccgcatcgtccggctttcggagcagcaacgctacgagcaggccgaggtgttg
accactcgcttgcgcagctatgtcgcggcatcacagcggctgcaccgactccaggccata
tcgcggtgctctcagatcgtggccgcgcagtggatagcgtctcctgcgccgaaccccggc
tggcagatccatgtcatccgttacggcaagctggcggctgcggcatgcgccgcaccgggc
agtgatccgatcgaggtcgcgaatcgagccgtccaactggccgaggtcgtctgggcgaca
ccgcacgacatgccatcggcctccgtggaggaagccgagctcatcgcacgctggctggag
accccgggtgtgcggctgatcgacatcgacggagagtggtcgatgcctgttcacggtggg
gtcgaccgcgcggatctgcccgagctgacagtgggcgccggcgccagggataacctttag
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