Propionimicrobium sp. PCR01-08-3: QQ658_09970
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Entry
QQ658_09970 CDS
T09133
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
prop
Propionimicrobium sp. PCR01-08-3
Pathway
prop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QQ658_09970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prop03400
]
QQ658_09970
Enzymes [BR:
prop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
QQ658_09970
DNA repair and recombination proteins [BR:
prop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QQ658_09970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WIY81844
LinkDB
All DBs
Position
complement(2178596..2179255)
Genome browser
AA seq
219 aa
AA seq
DB search
MSEKHELAGRPRRPSPMGGRRPTREDLLRFAVDDPDAIDDILPRSDDQLHMLIVGINPGL
WTAAVNAPFARPGNRFWPSLYRAGLTDHVVDAAAGLSSQDENQLLSRGIGLTNLVGRATV
RADELTRAELRAGGSRLTQRVTSLRPHVVAIAGITAFRAAFAQPKARLGEQDTSVIPGWP
ANVRLWVVPQPSGLNAHETIDSLAERWKEVWNVVERLAG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaaacacgagctggcgggccggccgcggcggccgtccccgatgggtggacgc
cggcccacgcgcgaggatctgctgcgtttcgctgtcgacgacccagacgcgatcgacgac
attctgccccgatcggacgatcagctgcacatgctgatcgtgggcatcaacccaggcctg
tggaccgctgctgtcaacgcgcccttcgcgcgtccgggcaacagattctggccttccctg
taccgtgcgggactcaccgatcatgtggtcgatgcggcagcgggtttgtcgtcgcaggac
gagaatcagctactcagcaggggcatcggcctgacgaatctcgtcggccgggcaaccgtg
cgggcggacgagttgacccgtgccgagttgcgtgccggcggcagccgcctgacccagcgc
gtcacgagcttgcgtccgcacgtggtggcgatagcgggaatcaccgcgtttcgggcggca
ttcgcgcagccgaaggcgcgtctgggagagcaggacacttcggtgattcccggctggccg
gcgaacgtgcgattgtgggtggttccgcaacccagcggactgaacgcccacgagacgatc
gacagcttggccgagcgctggaaagaagtgtggaacgtcgtggagcggcttgccggctaa
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