Proteiniclasticum sp. QWL-01: P6M73_01120
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Entry
P6M73_01120 CDS
T08970
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
proq
Proteiniclasticum sp. QWL-01
Pathway
proq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
proq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P6M73_01120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
proq03019
]
P6M73_01120
03009 Ribosome biogenesis [BR:
proq03009
]
P6M73_01120
Enzymes [BR:
proq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P6M73_01120
Messenger RNA biogenesis [BR:
proq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P6M73_01120
Ribosome biogenesis [BR:
proq03009
]
Prokaryotic type
rRNA helicases
P6M73_01120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
CMS1
NDK
Motif
Other DBs
NCBI-ProteinID:
WFF74509
LinkDB
All DBs
Position
228442..230082
Genome browser
AA seq
546 aa
AA seq
DB search
MEQNSFDGLGLAPEVLKAIQDMGFEEPSQIQAAIIPTLMSGSDAIGQAQTGTGKTLAFGA
PMISILRKSKRKVSGLVLAPTRELAVQVSDELTRLSSKTNLRILPVFGGAPIDRQMRALK
EGVDIVVGTPGRVIDLINRKKLMVEDIEFFVLDEADEMLNMGFIEDVEEILSHASDNRQT
MLFSATMPPAIKNLTKRFLKPDAEHITIKKVSLTVDTVEQYYFEIKHKDRFESLCRILDA
TSHSTVLIFCNTKRNVDTLTDHLKSRGYDVEGMHGDINQAQRMRTLAKFKEGTIEFLVAT
DVAARGIDVENISHVINYDLPQDLEAYVHRIGRTGRAGRTGTAFSLVTPREYMDIKQIEK
MTHSKIRRKEIPTVEDIFETKYADILTDVREELEKEDYKRFLPHVTALDEDYNLAEVAAA
LMMMRYRDEVSFDYTQNKLEQAQRNARVFITVGKMDGLNPLKLLKFLQSNTKVDSRDIGD
IEILEKFSFFEIKEDLAAPVIEACSGKKLLGRKAAMDIAEGSGKRKSRSSRPQSDKPHPF
KRKKVY
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtggagcagaacagctttgacggactggggctggcgccggaagtgctgaaagccatccag
gacatggggtttgaagaaccctcgcagattcaggctgccatcatccctaccctgatgtca
ggcagcgatgccattgggcaggcacagacgggaaccggaaaaaccctggcctttggggca
cccatgatttccattctgaggaaatccaagcgcaaggtatccggcctggtgctggctccg
acccgtgaactggcggttcaggtcagtgatgagctgacgcgcctgtccagcaagacaaac
ctgcgcatcctgcctgtcttcggcggcgcgcccattgaccgtcagatgagagccctcaag
gaaggggtcgatatcgtagtcggaactccgggacgggtcatcgatctgatcaaccgcaaa
aaactgatggtcgaagacattgagttcttcgtactggatgaagcggatgaaatgctgaat
atgggctttatcgaagatgttgaggagattctcagccatgcctccgacaatcgtcagacc
atgctgttctccgccaccatgccgcccgccatcaagaatctgaccaagcggttcctgaag
ccggacgcggagcacatcaccatcaagaaagtaagtctgaccgttgatacggtggaacag
tactactttgaaatcaagcacaaggatcggtttgagtcactttgccggattctggatgcc
acgagccattccacggttctgatcttctgcaacaccaagcgcaacgtcgatactctgacg
gatcacctgaagagccggggctacgatgtggaaggcatgcacggcgacatcaaccaggct
cagcggatgcgtaccctggccaagttcaaggaaggcaccatcgaattcctggtagccact
gatgtagcagcccgcggcatcgatgtggagaatatctcccatgtcatcaactacgacctg
ccccaggatctggaagcctatgttcaccgcatcggccggactggccgggccggacgtacc
ggtaccgcgttctccctggtaactccccgggagtacatggacatcaagcagatcgagaag
atgacccattccaagattcgccgcaaggaaatcccgaccgtcgaagatattttcgaaacc
aagtatgctgatatcctgaccgatgttcgggaagagctggagaaagaagactataagcgc
ttccttccccatgtcaccgcactggacgaggattacaacctggcagaagtggccgccgca
ctcatgatgatgcgctaccgcgatgaagtatccttcgattacacccagaataaactggaa
caggctcagcgcaacgccagagtgttcatcaccgttggcaaaatggacggtctgaatccg
ctcaagctcctgaagttcctgcagagtaacacgaaggtcgattcacgggacatcggcgac
atcgagatcctggagaagttcagcttctttgaaatcaaggaagatctggccgctccggtc
atcgaagcctgctccggcaagaagcttctgggccgcaaggcagccatggacattgcggaa
ggcagcggaaaacggaaatccagatccagccgtccccagtccgacaaaccccatcccttc
aaacgaaaaaaagtatactaa
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