Proteiniclasticum sp. QWL-01: P6M73_01960
Help
Entry
P6M73_01960 CDS
T08970
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
proq
Proteiniclasticum sp. QWL-01
Pathway
proq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
proq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P6M73_01960 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
proq03021
]
P6M73_01960 (rpoC)
03400 DNA repair and recombination proteins [BR:
proq03400
]
P6M73_01960 (rpoC)
Enzymes [BR:
proq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P6M73_01960 (rpoC)
Transcription machinery [BR:
proq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P6M73_01960 (rpoC)
DNA repair and recombination proteins [BR:
proq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P6M73_01960 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
SHOCT
Motif
Other DBs
NCBI-ProteinID:
WFF73239
LinkDB
All DBs
Position
424422..428006
Genome browser
AA seq
1194 aa
AA seq
DB search
MIELNNFDALQIGLASPDKIRDWSRGEVKKPETINYRTLKPERDGLFCERIFGPMKDWEC
HCGKYKRVRYKGIVCDRCGVEVTKAKVRRERMGHIELASPVSHIWYFKGIPSRMGLILDM
SPRSLEKILYFANYVVLDPKGTGLAKKQLLSEKEYREAEDKYGYNSFVAQMGAEAVLKLL
EAIDLEAQSEELSNDLKTATGQKKIRIIRRLEVIESFRKSGNRPEWMVISVIPVIPPDIR
PMVQIDGGRFATSDLNDLYRRVINRNNRLKKLMDLRAPDIIVRNEKRMLQEAVDALIDNG
RRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPK
EMALELFKPFVMKKLVENGTSHNIKSAKRMVERVHPQVWDILEDVISDHPVLLNRAPTLH
RLGIQAFQPILVDGRAIKLHPLVCTAYNADFDGDQMAVHVPLTMEAQAEARFLMLAAGNI
LKPSDGKPVSVPTQDMILGSYWLTMVREGSLGDGRFFKDKEEALMAYGTQQIHLQAPINV
RMYREVDGEQKAAMIHTTVGKIIFNESIPQDLGFVDREDPATMFNLEIDFLVTKKNLGKI
IDKCYLKYGPIETSKILDEIKSKGFHYSTQGAVTVAISDMVVPEAKHILLEEADQTIKKI
ESMYNRGLITDEERYQSVIDKWTKTTDGVAKALMKSLDKFNPIFMMADSGARGGESQIKQ
LAGMRGLMANPSGKTVEIPIRASFREGLDVLEFFISTHGARKGNADTALKTADSGYLTRR
LVDVSQDVIVREDDCGTDEGIIIHDVKNGNEVIEGLQERLTGRFPAQDILHPKTGEVLVA
KNEYINPHLAEEIVKSGVTEAKIRSVFTCQTRTGVCAKCYGMNMATAREINIGEAVGIIA
AQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRIEELFEARKPKGLALVSENGGTVRIEET
KKKRIIYVTSEDGVETSYDIPFGSRIAVADGDVVNAGDELTEGSINPHDIMRIKGVDGVR
RYILSEVQKVYRGQGVDINDKHLEVVVRQMTRKIKIADAGGTELLPGTLVDFFDFDEANR
VAEENGLVPAQGEQVLLGITKASLATDSFLSAASFQETTRVLTDAAIKGKIDPLLGLKEN
VIIGKLIPAGTGMTRYRAIKLNTDDVVPVEEHVHAKPRELSEEDLLDFNEDDQE
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
ttgatagaattaaataattttgatgcattgcaaatcggtttggcttctcctgacaagatc
agagactggtcccgcggagaagtaaaaaaacctgaaacaatcaactacagaaccctcaag
ccggaacgggatggcctgttctgcgagaggatcttcggacccatgaaagactgggaatgc
cactgcggcaagtacaagcgagtccgctacaaaggcatcgtctgcgaccgctgcggcgtg
gaagtcaccaaagccaaggttcgccgggaacggatgggccacatcgaactggcatcaccc
gtatcccatatctggtacttcaagggcatcccgtcccggatgggactgatcctggatatg
agcccgcgctccctggagaaaatcctgtacttcgccaactacgtcgtactggatcccaag
ggcaccggcctggccaagaagcagctcctgtccgagaaggaataccgcgaagcggaagac
aagtacggctacaactccttcgttgcccagatgggcgctgaggctgtgctcaagctcctg
gaagccatcgacctggaagctcagtcggaagaactgagcaatgacctcaagacggctacc
ggacagaagaagatccggatcatccgccgcctggaagtcatcgaatccttccgcaagtcc
ggcaaccggcccgagtggatggtcatttccgtaattcccgtgatcccgccggatatccgg
cccatggttcagatcgacggcggccgtttcgccacctccgacctgaatgatctctaccgc
cgcgtcatcaaccgcaacaaccggctgaaaaagctgatggacctgcgcgctccggacatc
attgtccgcaatgaaaagcgcatgctccaggaagcggtggacgctctcatcgacaacggc
cgccgcggccgtccggtgaccggccccggcaaccgccccctcaagtccctgtccgatatg
ctcaagggaaaacagggccgtttccggcagaatctgctgggaaaacgagttgactactcg
ggccgttcggttatcgtcgtcggaccggaactgaaaatgtaccagtgcggtctccccaag
gaaatggcactggagctgttcaagcccttcgtcatgaagaaactggtggaaaacggcacc
tcccataacatcaagagtgccaagcgcatggtggagcgggttcacccccaggtctgggac
atccttgaggatgtcatctccgatcatccggtcctgctgaaccgcgccccgacactgcac
cgtcttggaattcaggctttccagccgattctggtggatggacgcgccatcaagctgcat
cccctggtctgtacggcctataacgccgactttgacggggatcagatggctgttcacgta
ccgctgaccatggaagcccaggcggaagcccggttcctgatgctggccgccggaaacatc
ctgaagccctccgacggaaaaccggtctccgtaccgacccaggatatgatcctcggttcc
tactggctgaccatggtccgcgagggatccctcggcgacggccgcttcttcaaggataag
gaagaagccctgatggcttacggcacccagcagattcatctgcaggcgccgatcaatgtc
cggatgtaccgggaagtggacggggagcagaaggctgctatgatccacaccaccgtgggc
aagatcatcttcaatgaatccattccccaggatctgggctttgtggaccgggaagatccc
gccaccatgttcaacctggaaattgactttctggtcaccaagaagaacctgggcaagatc
atcgataaatgctacctcaaatacggtcccattgagacctccaagatcctcgatgagatc
aagagtaagggattccattactccacgcagggcgcggtcaccgttgccatctccgacatg
gtggttcccgaagccaaacacatcctgctggaagaagccgatcagaccatcaagaagatt
gagtccatgtacaaccgcgggctcatcaccgatgaggaacgctatcagtccgtcatcgac
aagtggaccaaaaccaccgatggcgtggccaaagccctgatgaagtctctggataagttc
aaccccatcttcatgatggcggactccggagcccgaggcggcgaatcccagatcaagcag
cttgccggaatgcgcggcctgatggccaacccgtccggtaagaccgttgaaattccgatc
cgggcctccttccgtgaagggttggacgtgctggaattcttcatctcaacccacggcgcc
agaaagggtaatgccgataccgctctgaaaacggcggattccggttacctgacccgtcgt
ctggttgacgtatcccaggatgttatcgtccgcgaggatgactgcggcaccgacgaaggt
atcatcattcatgatgtcaagaacggcaacgaagtcatcgaaggactgcaggaacgtctc
accggccggttcccggcccaggacatcctgcatcccaagaccggcgaagtcctggttgcc
aagaatgaatacatcaatccccatctggccgaagaaatcgtcaagagcggcgtgaccgaa
gccaagatccgctccgtctttacctgccagacccggaccggtgtctgcgccaagtgctac
ggcatgaacatggctactgcccgtgagatcaacatcggagaagcggtcggcatcattgcc
gcccagtccatcggtgaaccgggtacccagctgacgatgcgtacgttccataccggcggt
gtcgccggatccgatattactcagggtcttccccgtatcgaagaactcttcgaagcccgc
aagccgaaaggtctggcgctggtttccgagaatggcggtacggtgcgcattgaagagacc
aagaagaaacggatcatctatgtcacctccgaggacggcgtggaaaccagctacgacatt
ccgttcggctcccgcattgcggtcgctgacggcgatgtggtcaatgccggtgacgaactc
accgaaggttccatcaatccccatgacatcatgcggatcaagggagtcgacggggttcgc
cgctacatcctctccgaagttcagaaagtttaccgcggacagggtgttgatatcaatgac
aagcatctggaagtcgttgtccgtcagatgacgcgcaagatcaagatcgccgatgccggc
ggtaccgaactgcttcccggaactctggtagacttcttcgattttgatgaagccaaccgg
gttgccgaagaaaacggtctggttccggctcagggcgaacaggtcctgctcggaatcacc
aaggcctccctggccacggattccttcctgtcggccgcttccttccaggaaacgacccgc
gtcctcaccgacgccgccatcaagggcaagatcgatccgctgctgggtctgaaggaaaat
gtcatcattggtaagctgattccggccggaacgggcatgacccgctaccgcgccatcaag
ctgaacaccgatgacgtggtaccggtggaagaacatgtccatgccaaaccgcgtgaactg
tcggaggaagatctgctcgacttcaatgaggacgaccaggagtaa
DBGET
integrated database retrieval system
