Proteiniclasticum sp. QWL-01: P6M73_06750
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Entry
P6M73_06750 CDS
T08970
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
proq
Proteiniclasticum sp. QWL-01
Pathway
proq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
proq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P6M73_06750 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
proq03021
]
P6M73_06750 (rpoD)
Transcription machinery [BR:
proq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P6M73_06750 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
WFF74539
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Position
1395958..1397019
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AA seq
353 aa
AA seq
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MDRDFLNSIVNRLLDKAKKTHSLNYAEINDELEDVEVTPAQIERIYEGLEAMGVEVIQES
KDEETEEEEVDLSVPEGISIDDPVRMYLKEIGKVSLLTSEQEVELAKRIEAGDEVAKQKL
AEANLRLVVSIAKRYVGRGMQFLDLIQEGNLGLIKAVEKFDFTKGFKFSTYATWWIRQAI
TRAIADQARTIRIPVHMVETINKLIRIERQLIQELGRAPQPEEIAKMMDMPADKVREIMK
IAQEPVSLETPIGEEEDSHLGDFIEDHDAPAPAEAAAFTMLKEQLMGVLDTLTPREEKVL
RLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYLD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggattttctcaattccattgtcaatcgactgctggacaaggcgaagaagact
cattcgctcaactacgccgaaatcaatgatgaactggaagatgtagaagtcaccccggcc
cagatcgagcggatctatgaagggcttgaagccatgggggttgaagtcatccaggagagc
aaggatgaggaaacggaagaggaagaagtcgatctgtctgttccggaaggaatttccatc
gatgatccggttcggatgtacctcaaggaaatcggaaaagtatcgctgctgacctccgag
caggaagtggagctggccaagcggattgaagccggagatgaagtggccaagcagaaactg
gcggaagccaacctgagactggttgtttccatcgccaagcgctacgttgggcggggaatg
cagttccttgacctgattcaggaaggcaacctgggtctgatcaaagcggtggagaagttt
gacttcaccaagggctttaaattctcaacctacgccacctggtggatccggcaggcaatt
acccgtgccattgcggatcaggccagaaccatccggattccggtgcacatggtggagacc
atcaataagctgatccggattgagcgacagctgattcaggaactgggccgggctccgcag
ccggaagaaatcgccaaaatgatggacatgccggccgataaggtgcgggaaatcatgaaa
atcgctcaggaacccgtttctctggaaacaccgattggtgaagaagaagattcccatctg
ggggacttcattgaggaccatgacgcgccggcgccggcggaggcagctgccttcaccatg
ctcaaggaacagctcatgggcgtgcttgacactctgacaccacgggaagaaaaagtgctg
cgccttcggtttggcctggatgacggtcgggccagaaccttggaagaggtcggcaaggag
ttcaacgtaactcgcgagcggattcggcagattgaagcgaaagcgctgcgcaaactgagg
cacccatcgcggtccaagaagctgaaggattacctggactag
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