Prosthecochloris sp. GSB1: CHL67_00105
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Entry
CHL67_00105 CDS
T04996
Name
(GenBank) ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pros
Prosthecochloris sp. GSB1
Brite
KEGG Orthology (KO) [BR:
pros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pros03019
]
CHL67_00105
03009 Ribosome biogenesis [BR:
pros03009
]
CHL67_00105
Messenger RNA biogenesis [BR:
pros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CHL67_00105
Ribosome biogenesis [BR:
pros03009
]
Prokaryotic type
rRNA processing factors
CHL67_00105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
CDC45
S1_RRP4
DnaJ_CXXCXGXG
DUF8260
Motif
Other DBs
NCBI-ProteinID:
ASQ89552
LinkDB
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Position
22512..24227
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AA seq
571 aa
AA seq
DB search
MKKTVKKQLLMNKSGDEIQVALVEEGRLAELVIERPDSLRSIGDIYLGRVHKVVEGLKAA
FVDIGQKSDGFLHFSDVGTTTEDYRALIEDDDDDENGEGEDEEGGGEGEPGEPEAGQPTR
AKARNGRQQDGEGSARRNGSGRDQDKSPDRRRQSYTQMIASKLKPNDSILVQVIKEPISN
KGSRLTSDITIAGRFMVLLPFGGSQIAVSRRVVSRKERARLKKLVRSMLPEGFGAIIRTV
AENQEEELLKKDLEKLLVKWTQIEEKLKDAKPPQLIFKEDTIISSVLRDSLTTDVTEVVA
NSVSIHKETLNYIQWAAPEMEKNVSLYQGKLPLFEGYGIAKDVESIFSRKVWLRSGGYII
IEHTEAMVVVDVNSGRYAAKKEQEENSLKTNLEAAREIVRQLRLRDIGGIIVVDFIDMLD
PKNAKKVYDAMKGELRQDRAKSNILPMSEFGIMQITRERIRPSLMQRMGDQCPACGGTGI
IQARCTTINQIERWLRKYALQQKTPFHQLDLYVSPTVAEPLKESDRNIELRWLLQHMLFV
RVKSDESLRSDDFRFYIRRNSKDVTTEYSDL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacagtgaaaaaacagttgttgatgaacaaatcgggcgacgagatccaggtc
gcgctcgtagaggaaggccgtttggcggaactcgtcatcgagcgtcctgacagcctgaga
agtataggcgacatatatcttgggagggttcacaaggtcgttgagggccttaaggccgca
tttgtagatataggccagaaatccgacggctttctgcatttttcagatgtcggcacgaca
accgaggattaccgggcgttgatcgaggacgatgacgacgacgagaacggcgagggagag
gacgaagagggaggcggcgaaggggagcctggcgaacccgaggcaggccagccgacgcgt
gcgaaggcccgcaacggcaggcagcaggacggtgaaggaagcgcccgcaggaacggttcg
ggacgcgatcaggacaagtcccccgatcggaggcgtcagtcctatacccagatgatcgca
agcaagctcaagcccaacgactccattctcgtccaggttatcaaggaacctatcagcaac
aaggggtcgagactgacctcggatatcaccatcgccgggaggttcatggttctgctgcct
ttcggaggaagtcagatcgcggtttcccgtcgggtcgtttctcgcaaggagcgggcaagg
ctgaaaaagctcgttcgctccatgctgcccgaaggcttcggcgccatcatccgcactgtg
gctgaaaaccaggaggaggagcttctgaaaaaagacctcgagaagctgttggtgaaatgg
acccagatcgaggagaagctcaaggacgcgaagcctccccagttgattttcaaggaagac
accatcatctccagcgtgctgcgcgattcgcttaccacggatgtcaccgaggtcgtcgcg
aattccgtgagcattcacaaggaaacgctgaactacattcagtgggccgcgccagaaatg
gagaaaaacgtcagcctctaccagggcaagctgcccctgttcgagggatacggcatcgcc
aaggatgtagaatccatcttttcacgcaaggtctggctgcgctccggaggctacatcatc
atcgagcataccgaggcgatggtggttgtcgacgtcaacagcggtcggtatgccgcgaag
aaggagcaggaggagaattcgctcaagaccaacctcgaggcggcccgcgaaattgtccgg
cagctcaggctccgcgatatcgggggtattatcgtggtcgatttcatcgacatgctcgat
ccgaagaacgcgaaaaaagtctacgatgccatgaagggcgaactgcggcaagacagggcg
aagtcgaacatcctgcccatgtcggaattcggaatcatgcagatcaccagggaacgtata
cgccccagcctcatgcagcgcatgggcgaccagtgtcccgcgtgcggaggcaccgggatc
atccaggcccgctgcactaccatcaaccagatagaacgctggttgaggaaatacgcattg
cagcagaagacgcccttccaccagctcgatctctatgtcagccctaccgtcgccgagccg
ttgaaggaaagcgaccgtaacattgaactgcggtggctgctccagcacatgcttttcgtg
cgtgtcaagtccgatgaaagcctcagaagcgacgattttcgtttttatattcgcaggaac
agcaaggatgtaaccaccgagtacagcgatctctga
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