Prosthecochloris sp. GSB1: CHL67_09310
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Entry
CHL67_09310 CDS
T04996
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pros
Prosthecochloris sp. GSB1
Pathway
pros03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHL67_09310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pros03400
]
CHL67_09310
DNA repair and recombination proteins [BR:
pros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHL67_09310
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CHL67_09310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_22
nSTAND3
AAA_18
AAA_15
Viral_helicase1
cobW
AAA_21
BsuBI_PstI_RE_N
Motif
Other DBs
NCBI-ProteinID:
ASQ91743
UniProt:
A0A222SLC4
LinkDB
All DBs
Position
1955761..1958616
Genome browser
AA seq
951 aa
AA seq
DB search
MSEYSHISIRGARVHNLKNISLDIPRNRFVVVTGISGSGKSSLAFDTIYAEGQRRFMETL
STYARQYIGNIERPDVDFIEGLSPVISIDQKSTSRSPRSTVGTITEIHDFIRLLYAKAGR
RYDPSTGEMLRKQSEDSIVDAILSLPEGTKVQLLSPLVTGRKGHYRELFERLLQKGFLRV
RVDGEFREMEKGMQLERYRNHTIELVIDRLVIKPGIRERLKQAVSLATGMSEHKSAVICA
PYESGPGEQFYSTKYAYSDGSVPIDTLAPNNFSFNSPYGACPECNGLGEIQQLSADLMIP
DRNLSLKQGAIEPFGKPGKRNLWHIIRAIAKKYRFTLETPLKDIPSEALDMLLRGSGKTA
IDVTYNYAGKEHIYPQQFSGAVAYVEELLKNSAAPKVREWAESFMLRMPCPECGGARLRR
ESLQVKIAGRNIHEVECLPLQEALDFFLGLPPGLTERELLVATPILHEITKRIEFLLNVG
LGYLTLGRGAQTLSGGEAQRIRLASQLGSQLSGVLYVLDEPSIGLHQRDNHKLITSLLNL
RDIGNTVLVVEHDKDTMLMADEIVDLGPGAGEHGGEIVAQGTAAELGDGSVTASYLKGHR
TVKAQKRPDTERKNEFMTLRGCRGNNLKNIDVRFPLGSLICVTGVSGSGKSTLINETLYP
VLARHFYRSKLLTHPYDSIEGLKHIDKVVSVDQSPIGRTPRSNPATYTGAFTFVRDFFAR
LPEAQIRGYKPGRFSFNVRGGRCETCQGAGTRKIEMNFLPDVYVECETCKGKRYNRETLQ
VRYRGRSIADVLDMTVEEAAEFFADFPRIRRILSTMQSVGLGYIKLGQQSPLLSGGEAQR
IKLSAELAKIQTGRTLYILDEPTTGLHFQDIQHLLDVLQKLVDKGNTVIVIEHNLDIVRN
ADWIVDLGPEGGKSGGELVVEGPPETVAATAASHTGRFLAEELDGARLRQG
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatacagccatatcagcatacggggagcacgggttcacaacctgaaaaatata
tccctcgacatccctcgtaacagattcgtggtggtgacgggcatatcgggttcgggaaaa
tcgagtctcgcgttcgacacgatctacgccgagggacagcgccgcttcatggaaacgctc
tccacctatgcaagacagtacatcggcaacatcgaacggcccgatgtcgatttcatcgaa
gggctttccccggtcatctccatcgaccagaaaagcaccagccgctctccgcgttcgacg
gtcggcacgatcaccgaaatacacgacttcatccgcctgctctatgcaaaggcgggacgc
cgctacgatccctcgacgggagagatgctgcggaaacagtcggaagattccatcgtggac
gcaatcctttccctgcctgaaggaacgaaagtacaactgctctcccccctggtcaccgga
aggaagggtcattaccgcgaacttttcgaacgcctccttcagaaagggttcctgcgggta
cgggtggacggtgaattccgggaaatggaaaaaggcatgcagctcgaacgatacagaaac
cacaccatcgagctggtaatagaccgactggtcatcaagcccggtatccgtgaacgcctc
aaacaggccgtttcgctcgccacgggcatgtcggagcacaaatccgccgttatctgcgcc
ccatacgaaagcggtcccggcgaacagttctacagcacgaaatatgcctattcagatggt
tcggtgccgatcgacaccctcgcgccgaacaatttcagcttcaactctccttacggtgcg
tgtcccgagtgcaacggactcggagagatacagcagctctcggcagatctgatgatcccc
gacagaaacctctccctcaaacagggagcgatagaaccattcggcaaaccgggcaagcgg
aacctctggcatatcatcagggcgatcgcgaaaaaataccgtttcacgctcgaaacaccg
ttgaaggacattccctccgaggcgctcgacatgttgctcaggggatcgggaaaaaccgcg
atcgacgtcacctacaactatgctggcaaggaacatatctatccgcagcaattttccggc
gcggtagcctatgtcgaggagctcctgaaaaactcggccgccccgaaagtgcgcgagtgg
gcggaaagcttcatgctgcgtatgccctgccccgaatgcggcggcgcgcgtctgcgcagg
gaaagcctccaggtgaagatcgcgggacgcaacatccacgaggtcgagtgcctgcccctg
caggaagccctcgatttcttcctcggcctgccgcccggactgacggaaagggaattgctc
gtcgcgacgccgatcctgcacgaaatcacgaaacgcatcgagttcctgctcaacgtagga
ctcggttacctaacgctcggcagaggcgcgcagacgctttccggaggcgaagcccagagg
atacggcttgcctcccagctcggttcgcagctcagcggcgtgctctacgttctcgacgaa
cccagtatcggactccaccagcgagataaccacaagctgataacctcgctcctgaatctc
agggatatcggcaacaccgtgctcgtggtggaacacgacaaggataccatgctgatggcc
gacgaaatcgtcgacctcggtccgggagccggcgaacacggcggtgaaatcgtcgcccag
ggcactgcggcggaactcggcgacggctccgtcacggcctcatacctcaaggggcacaga
acggtcaaggctcagaaacgcccggataccgaacgaaaaaacgagttcatgacgctccgg
ggatgccggggcaacaacctgaaaaacatcgacgtgcgtttcccgctcggaagcctgatc
tgcgtcaccggcgtcagcggctccggaaaatcgaccctgatcaacgaaacgctctatccg
gtgctggcgagacatttctaccgttcgaaactcctgacccatccctacgattccatcgaa
ggcctgaaacacatcgacaaggtcgtcagcgtcgaccagtcgccgatcggacgtactcct
cgctccaaccccgcgacatacaccggcgcgttcaccttcgtcagggatttcttcgcgcgt
cttcccgaagcccagatccggggatacaaacccggacggttcagtttcaatgtcagaggc
gggcgctgcgaaacctgccagggagcgggcacgcgcaagatcgagatgaacttcctgcct
gacgtgtacgttgaatgcgaaacctgcaagggaaaacgttacaaccgcgaaacactccag
gtccgttaccggggcagatccattgccgatgtgctcgacatgaccgtggaggaagctgcc
gaattcttcgccgatttcccgagaatcagacgcattctttccacgatgcagagcgtcggg
ctcggttacatcaaactcggacagcagtccccgctgctgtcaggaggcgaggcgcaacga
ataaagctctcggccgaactggcgaagatccagaccggcagaacgctctatatactcgac
gaaccgacgacgggcctgcacttccaggatatccagcatctgctcgacgtgctgcagaaa
ctcgtcgacaaggggaacacggtcatcgtcatcgaacacaacctcgacatcgtcagaaac
gccgactggatcgtcgatctcggtcccgaaggaggaaaaagtggcggtgaactggtcgtg
gaaggaccgccggaaaccgtcgcggcaaccgccgcatcccacacgggaaggtttctcgct
gaagagctggatggggcgcgtttgcggcaggggtaa
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