Prosthecochloris sp. GSB1: CHL67_10740
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Entry
CHL67_10740 CDS
T04996
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pros
Prosthecochloris sp. GSB1
Pathway
pros03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pros00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHL67_10740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pros03021
]
CHL67_10740
03400 DNA repair and recombination proteins [BR:
pros03400
]
CHL67_10740
Enzymes [BR:
pros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHL67_10740
Transcription machinery [BR:
pros03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CHL67_10740
DNA repair and recombination proteins [BR:
pros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CHL67_10740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASQ91327
LinkDB
All DBs
Position
complement(2272440..2273426)
Genome browser
AA seq
328 aa
AA seq
DB search
MIYQMQMPEKIEVDEGTHSDRYGKFIAQPLERGYGVTLGNAMRRVLLASLPGTAITGVKI
DGVFHEFSTVEGVREDVPEIILNLKRVRFRSTTRRGCKTTVTVEGPADFTAADIVAQEGE
FEVLNGDLHIATVNEGSTLEVDVYIGRGRGYVPAEENRADGMPIGFIPLDAIFTPIKNVK
FSVENTRVGQRTDYEKMILDVETDGSISPDDSISLAGKIINEHVSLFADFSPTEEEFSEE
EYKQQDDEFESMRKLLQTRIEDLDLSVRSHNCLRLAEIESLADLVSRKEDELLTYKNFGK
KSLMELKEQLDKFGLKFGMDVTKYQMKG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatataccaaatgcagatgcctgagaagatcgaggttgatgaaggtacgcattccgat
agatacggcaagttcatagcccagccgctcgagagaggctacggtgtgacgttgggcaat
gcgatgaggcgggttctgctggcttcacttcccggtacggctataaccggtgtgaagatc
gatggggtctttcatgaattctcgactgtcgagggagttcgtgaggatgttcctgaaatc
atcctgaacctgaagagggtccggtttcgctccacgaccagaaggggctgcaagacgacg
gttaccgtcgagggcccggcagattttaccgcagccgacatcgtcgcccaggaaggcgag
ttcgaggtgctcaacggagacctgcatattgccacggtcaacgagggctcgactcttgag
gtagatgtttatatcggccgcggaaggggatatgtccccgcggaggaaaaccgtgctgac
ggcatgccgatcggcttcattcctctcgatgcgatattcactcccataaagaacgtcaag
ttctcggtggaaaacacccgcgtcggccagcgcacggactatgaaaagatgattctcgac
gtcgagaccgacggttcgatatcccccgacgattcgatcagtctcgccggaaagatcatc
aacgagcatgtttcgcttttcgccgacttttcgccgaccgaggaggagttctccgaagaa
gagtacaagcagcaggacgacgagttcgaaagcatgcgcaagctgctgcagacgagaatc
gaagatctcgatctttcggtgcgttcacacaactgcctgagacttgccgagatagaatcc
cttgccgacctggtttcccgcaaggaggatgagcttcttacctacaagaacttcggaaag
aaatcgctgatggaattgaaggagcagctcgacaagttcggtttgaaattcggcatggat
gtcaccaaataccagatgaagggctga
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