Proteus sp. CD3: BTA34_00225
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Entry
BTA34_00225 CDS
T06244
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
prot
Proteus sp. CD3
Pathway
prot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTA34_00225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prot03019
]
BTA34_00225
03016 Transfer RNA biogenesis [BR:
prot03016
]
BTA34_00225
Enzymes [BR:
prot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BTA34_00225
Messenger RNA biogenesis [BR:
prot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BTA34_00225
Transfer RNA biogenesis [BR:
prot03016
]
Prokaryotic type
tRNA degradation factors
BTA34_00225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
S1_RRP5
Spt6_S1
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
QEZ90860
LinkDB
All DBs
Position
41737..43866
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AA seq
709 aa
AA seq
DB search
MLNPTVRKFQYGQHTVTLETGMMARQATAAVMVDMDGTAVFVTVVAKKKVKAGQDFFPLT
VNYQERSYAAGRIPGSFFRREGRPGEGETLIARLIDRPLRPLFPEGFLNEIQIVATVVSV
NPQVNPDIVAMIGASAVLALSGVPFNGPIGGARVGFIDGQYVLNPTVDELKVSKLDLVVA
GTAGAVLMVESEADLLSEEEMLGAVVFGHDQQQVVIENINALVAEVGKEKWDWAPEAINQ
TLHDRIAQLAQARIGDAYRITEKQERYEQIEAIRDEVIATLVAEDETLDEAEISEIFSGL
EKNIVRARVLAGEPRIDGREKDMVRALDIRTGLLPRTHGSALFTRGETQALVTATLGTAR
DAQTIDDIMGEHTDTFLLHYNFPPYSVGETGMMGSPKRREIGHGRLAKRGVLAVMPTIEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKESVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRNGVSALQMDIKIEGITREIMQVALNQAKSARLHILGVMEDA
ISQPRADISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
SGDQAKQAIARIEEITAEVEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVSDYLEMGQEVPVKVLEIDRQGRIRLSMKEAQANQQEATETSSEDSAN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatcctacagttcgtaaatttcaatacggtcaacatactgttacgttagaaaca
ggtatgatggctcgtcaagcaacagccgctgttatggttgacatggacggcactgctgtt
tttgttaccgttgttgctaagaaaaaagttaaagctggacaagatttcttcccattaaca
gttaactaccaagagcgttcatacgctgctggtcgtatcccaggtagcttcttccgccgt
gaaggtcgtcctggtgaaggcgaaacgttaattgcacgtttaattgaccgccctttacgt
ccattattcccagaaggtttcttaaacgaaattcaaatcgttgctaccgttgtttcagtt
aacccacaagttaacccagatatcgttgcaatgattggtgcttctgcggtattagcgctg
tcaggtgttccattcaatggtcctatcggtggcgctcgtgttggttttatcgatggacaa
tatgttctaaacccaactgttgatgagctgaaagttagcaaattagacttagtggttgct
ggtactgcaggcgcggtactgatggtagaatcagaagctgatttattatcagaagaagaa
atgttaggtgcagtcgtatttggtcatgatcaacaacaagttgtgatcgaaaacatcaat
gcattagttgcagaagtgggtaaagaaaaatgggattgggcgccagaagctatcaaccaa
actttacatgaccgtattgcacaactagcacaagctcgtattggtgatgcttaccgtatc
actgagaaacaagagcgttatgaacaaatcgaagcaatccgtgatgaagttatcgcaacg
ttagttgctgaagatgaaactttagatgaagctgaaatcagcgaaatcttctcaggtctt
gagaaaaacatcgttcgtgctcgcgtattagctggcgaaccacgtattgatggtcgtgaa
aaagacatggtacgtgcattagacattcgcactggcttattaccacgcactcacggttca
gcactgtttactcgtggtgaaactcaggctctggtaactgcaacattaggtactgcgcgt
gatgctcaaactatcgatgacatcatgggcgagcacactgatacattcttactgcactat
aacttccctccatactctgttggtgaaacaggcatgatgggttcaccaaaacgtcgcgaa
atcggtcatggccgtttagcaaaacgtggtgtgttagcagtaatgccaacaattgaagaa
ttcccatataccgttcgtgtggtttctgaaatcaccgaatcaaatggttcatcttcaatg
gcatctgtttgtggtgcttctttagcgctgatggatgcaggtgtaccaattaaagaatct
gttgcaggtattgcaatgggcttagtgaaagaaggcgacaactttgttgttctttctgat
attctgggtgatgaagaccatttaggcgatatggactttaaagttgcgggtagccgtaac
ggtgtcagcgcattacaaatggatatcaaaatcgaaggtatcactcgcgaaatcatgcaa
gttgcattaaaccaagcgaaaagcgcacgtctacacattttaggcgtaatggaagatgca
attagccaacctcgtgctgatatttctgaattcgcaccgcgcattcacactatcaaaatt
aatccagacaaaatcaaagacgttatcggtaaaggcggttctgttatccgtgcattaacg
gaagaaactggcacaactatcgaaatcgaagatgatggtaccgtgaagattgctgcaaca
agtggcgatcaagcaaaacaagctatcgcacgtatcgaagagattactgctgaagttgaa
gtgggtcgtatctacaacggtaaagtaactcgtatcgttgatttcggcgcattcgttgct
atcggtggcggcaaagaaggtctggttcatatttctcaaatcgcagacaaacgcgttgag
aaagtgagtgactacttggaaatgggtcaagaagttccagttaaagtattggaaattgac
cgtcaaggccgtattcgcttaagcatgaaagaagctcaagctaatcagcaggaagcaaca
gaaacttcttctgaagattctgcgaattaa
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