Proteus sp. CD3: BTA34_08140
Help
Entry
BTA34_08140 CDS
T06244
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
prot
Proteus sp. CD3
Brite
KEGG Orthology (KO) [BR:
prot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prot03019
]
BTA34_08140
Enzymes [BR:
prot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BTA34_08140
Messenger RNA biogenesis [BR:
prot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BTA34_08140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_19
WHD_HA2
AAA_22
nSTAND3
ResIII
NACHT
AAA_25
DUF6145
NTPase_1
PhoH
nSTAND_NTPase5
ABC_tran
T2SSE
AAA_11
FSIP2
TsaE
Motif
Other DBs
NCBI-ProteinID:
QEZ92319
LinkDB
All DBs
Position
complement(1789224..1793120)
Genome browser
AA seq
1298 aa
AA seq
DB search
MTLSSATLYQEIEQLSLREQQRLRKRLRGIAKINNEESKQAVLSAIKDDITTAQQMIIRR
RANCPEITYPENLPVSQKKDAIYNAIRDNQVVIIAGETGSGKTTQIPKICLELGRGIKGF
IGHTQPRRLAARSVAERIAHELKSTLGESVGYKVRFSDHVGDNTLVKLMTDGILLAELQQ
DKLLLQYDTIIIDEAHERSLNIDFILGYLKQLLPKRPDLKVIITSATIDPERFSKHFNQA
PIIEVSGRTYPVEVRYRPIGGDELDNDKDMTDGIVDAIDELSRESAGDILIFMSGEREIR
DTADALNKLQLRHTEVLPLFARLSNSEQNRIFHPHNGRRIILATNVAETSLTVPGIKYVI
DTGFARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSDGICIRLYSEDDFISRSEFT
DPEILRTNLASVILQMTSIGLGDISAFPFVQPPDKRNIQDGVRLLEELGALQNETDHNGA
YRLTPMGKQLAQLPIDPRLARMVLEARKYGAVKELMVITSALSIQDPRERPMDKQQASDE
KHRRFQDKDSDFLSFLNMWDYLKTQQKELSHSQFRKLCRQEFLNFMRVREWQDVYTQLRQ
VVKELGFPVNSEPADFRSVHVALLSGLLSHIGQKDADKQEFTGARNARFSIYPGSGLFKK
PPKWTMVAELVETSRLWGRIAARVEPEWIEPIAEHLVKHHYSEPHWSKAQGAVMANEKVT
LYGLPIVASRPINYSQIDPLLCRELFIRHALVEGDWQTRHAFFRENLKLRTEVEELEHKS
RRRDILVDDETMFTFYDQRIPQDVVSSRHFDKWWKEAQKASPDLLNFEKSMLIKDDAKRV
SALDYPNYWHQDNLKLRLTYQFEPGTAADGVTVHIPLPILNQVKEEGFDWQIPGIRHELI
VALIKSLPKPIRRNFVPAPNYASAFLERVPQVEGSLLDKLENELRRMTGVTVDRESWQLD
QVADHLKMTFRVVGDKNKTLAESKDLNKLKENLKEKVQETLSAVADDGIEQQDLHIWSFG
DLPQRYEQKRGGYSVKAYPALVDEKNSVSIKLFETESEQQTSMWEGVRRLLLLNIPSPIK
YLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLMASYGGLIWQEGEYQKLQEYVRA
ELNDAVVEIAKQVEAILTQVFAINKRLKGRVDISVAFALSDIKAQLGQLVFPGFVTSHGW
KRLADIPRYLSAIEKRMEKLAIDPNRDRAQMSRVENVIQQWQQWLGKLTEKQKQQEEVQN
IRWMIEELRVSLFAQQIGTPYPISDKRILQAMEQVSFN
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
gtgacattatcatctgccacgctctatcaagaaatagagcaattatcgctgcgggagcag
cagcgattaagaaaacgtctacgtggcatcgctaaaattaataatgaagagtctaaacaa
gcggtattaagtgcaattaaagacgatattacaacagcacaacagatgataattcgccgt
cgtgccaattgtcctgaaattacttacccagaaaaccttcctgttagccaaaagaaagat
gccatttataatgcaatacgcgataaccaagttgttattattgcgggggaaactggctca
ggtaaaacaacgcagatccctaaaatttgccttgaattaggaagagggatcaagggtttt
attggccacactcagcctcgtcgtttagctgcacgttcagtggctgaacgtatcgctcat
gaattaaaaagcacgttaggagaatctgtaggttataaggttcgctttagtgatcatgtt
ggtgataataccctcgttaagctaatgacagacggtattttattggctgaattacagcaa
gataaactgctattacaatatgacaccatcattattgatgaagcccatgaacgtagctta
aatatcgactttattcttggttatttaaagcagctattacctaagcgccctgatttaaaa
gtcattattacttctgcaaccattgatcctgaacgtttttccaaacatttcaatcaagcg
cctatcattgaagtttcaggtcgaacttatcctgttgaagtgagatatcgtcctattggt
ggtgacgaacttgataatgataaggatatgacagatggcattgttgatgctattgatgaa
ttaagcagagaaagtgcgggtgatattcttatttttatgagcggtgagcgagaaattcgc
gatactgctgatgcgctgaataaactacaacttcgccatactgaagtattgcctttattt
gcccgtttatctaacagtgaacaaaatcgaatttttcatcctcataacggcaggcgtatt
attttagccactaacgttgccgaaacttcattaactgtaccaggcattaagtacgttatt
gataccggttttgcacgtattagtcgttatagttatcgaactaaagtacaacgacttcca
atagaacctatttctcaagcttcagcaaatcagagaaaagggcgttgtggccgtgtttct
gatggtatttgtattcgtctttattcagaagatgattttatttctcgttctgaatttact
gatcctgaaatattaagaactaaccttgcatcggttattttgcaaatgacatcgataggg
ttgggggatattagtgctttcccatttgtacagccaccggataaacgcaatattcaagat
ggtgtgcgtttattagaagaactaggcgcgttacaaaatgaaaccgatcacaatggtgct
tatcgtttaaccccaatggggaaacaacttgctcaacttcctatcgatcctcgtttggcg
agaatggtacttgaagcgcgtaaatatggtgcagtaaaagaattgatggttattacatct
gcactttcaattcaagatccgcgcgaaagaccgatggataaacagcaagcttctgatgaa
aaacatcgtcgcttccaagataaagattctgatttcttgtcttttttaaatatgtgggat
tatttaaaaactcaacaaaaagagttgagtcattctcaatttagaaagctgtgtcggcaa
gagtttttaaactttatgcgtgttcgagagtggcaagatgtttatacgcaattacgacaa
gttgttaaagaactcggctttcctgttaacagtgaacctgccgattttagaagcgtccat
gttgcgttattaagtggtttattgtcgcatattgggcaaaaagatgctgataaacaagag
tttactggggcgcgaaatgcgcgcttttctatttatccggggtctggtttatttaaaaaa
ccaccaaaatggacaatggtcgctgaactggtcgaaacctctcgtttatgggggcgaatt
gcagcacgcgtagagccagaatggattgaacctatagctgaacatttagtgaaacatcac
tatagcgagccacattggtcaaaagcgcaaggcgctgtaatggctaatgaaaaagttacg
ctatatggtttacctattgttgcctctcgacctattaattatagccaaattgatccgtta
ttatgccgggagctttttattcgccatgcgttagtagaaggtgattggcaaactcgtcat
gcatttttccgtgaaaatttaaaattacggactgaagtggaagagttagagcataaatct
cgtcgtcgtgacattcttgttgatgatgaaacaatgtttactttctacgatcaacgaata
ccacaagacgttgtttcatcacgtcattttgataaatggtggaaagaagcacaaaaagca
tcaccggatctgcttaactttgaaaagagcatgcttatcaaagatgatgctaagcgtgtg
agtgcattagattatccaaattattggcatcaagataatttaaaattgcgcttaacttat
caatttgaaccgggtacagcggctgatggtgtcactgttcatattccattaccgatttta
aatcaggtaaaagaggaaggttttgattggcaaattccgggcattcgccatgaattgata
gtggctttaattaagtcattaccaaaacctattcgtcgtaattttgtcccagcacctaat
tatgcctctgcttttttagagcgcgtacctcaagttgaaggtagcttactcgataaactc
gaaaatgaattacgccgtatgacaggcgtgactgttgatagagagagttggcaactagac
caagttgctgatcacttaaaaatgacattccgtgttgttggcgataaaaataaaacactg
gcagaaagtaaagatctcaataaattaaaagagaacttaaaggaaaaagtgcaagaaaca
ttatcagcagtcgctgatgatggcattgaacaacaagatttacatatttggagttttgga
gatttgcctcagcgttatgagcaaaaacgcggtggttattcagtgaaagcttatccggca
ctcgttgatgaaaaaaacagtgtgagtattaagctttttgaaaccgaatctgaacaacaa
acttccatgtgggaaggcgtaagacgcttattgttattaaatattccgtcaccgataaaa
tacctacatgagaaattacctaacaaagcaaaactgggtctttactttaacccttatggc
aaagtgttagagctgattgatgattgtattgcttgtggtgttgataaacttatggcttct
tatggtggtttaatttggcaagaaggcgaatatcaaaaactgcaagaatatgtcagagct
gagttaaatgatgctgtggttgaaatagcaaaacaagttgaagcgattttaactcaagta
tttgctatcaataagcgtctaaaagggcgggtggatattagtgttgcttttgcattatct
gatattaaagcccaacttggtcagttagtttttcctggttttgtgacttcgcatggatgg
aaacgtcttgcggatattcctcgttatttgagtgcaattgaaaaacgaatggaaaaattg
gccattgatcctaatcgtgatcgcgctcaaatgagccgagttgaaaatgttattcagcag
tggcaacagtggttaggtaagttaacagagaaacaaaagcagcaagaagaagtgcaaaat
attcgttggatgatagaggagcttagagtaagcctgtttgctcaacagataggtacacca
tatccaatatcagacaaacgtatattacaggcgatggaacaagtcagttttaactaa
DBGET
integrated database retrieval system
