Proteus sp. CD3: BTA34_15230
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Entry
BTA34_15230 CDS
T06244
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
prot
Proteus sp. CD3
Pathway
prot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTA34_15230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prot03021
]
BTA34_15230
03400 DNA repair and recombination proteins [BR:
prot03400
]
BTA34_15230
Enzymes [BR:
prot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTA34_15230
Transcription machinery [BR:
prot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTA34_15230
DNA repair and recombination proteins [BR:
prot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTA34_15230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
EAD9
Motif
Other DBs
NCBI-ProteinID:
QEZ93608
LinkDB
All DBs
Position
complement(3414878..3419104)
Genome browser
AA seq
1408 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVVEGGMTSLERGQILTEEQYLDALEEFGDEFDAKM
GAEAVQNLLQSMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFMQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLETRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGDPIIVPSQDVVLGLYYMTRDCINAKGEGMVLSGPKEAERVYRAG
LASLHARVKVRITEEIKDGEGNITTETSLKDTTVGRAILWMIVPKGLPYALVNQPLGKKA
ISKMLNTCYRVLGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPAKKAEIIAEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTETVINRNGEEEQQVSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTTEGVMMTPVIEGGDVKEPLRERVL
GRVAAEDILKPGTADILVPRNTLLNEKLCDLLEENSVDSVKVRSVVTCNTDFGVCANCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVRNKGTLKL
FNAKFITNTAGKLVITSRNTELRLIDEFGRTKESYKVPYGAQLAKGDGEAVNGGETVANW
DPHTMPVVSEVSGIIRFADMVDGQTITRQTDELTGLSSLVVLDSAERTGSGKDLRPALRI
TDAQGNDVLIPNTDMPAQYFLPGKAIVQLDDGIAINAGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVISPLDGSDAYEEMIPKWRQLNVFE
GEVVERGDVISDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKVTIENAGSSEFLEGEQVEYARVKVSNRVLEDDGKVPATYARDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMKRRQSQLPTD
ETETTISADEASANLAELLNAGFGGLKD
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaaccaagaccgaagagtttgatgcgatc
aaaattgctctggcatcacctgatatgatccgttcatggtcatttggtgaagttaaaaag
ccagaaacaattaactaccgtacgttcaaaccagaacgtgacggtcttttctgcgcccgt
attttcggaccagtaaaagattacgaatgtttgtgtggtaaatacaaacgtttaaaacac
cgtggtgttatctgtgagaagtgtggcgttgaagttacacaaactaaagttcgtcgtgaa
cgtatgggtcacatcgaattagcttctccagttgctcacatttggttcttgaaatcactg
ccgtcccgtatcggtctgctgctggatatgcctctgcgcgatattgaacgtgtactgtat
ttcgaatcttacgttgttgttgaaggcggtatgaccagccttgaacgcggtcaaatctta
acagaagagcaatacctcgacgcattagaagaattcggtgacgaatttgacgcgaagatg
ggtgcagaagctgttcagaacttgttacagagcatggatctggaacaagagtgtgaaacg
ctgcgtgaagagttaaatgaaactaactctgaaactaaacgtaagaaactgactaaacgt
atcaagttacttgaagcattcatgcaatcaggcaataaacctgagtggatgatcttaact
gtactgcctgtgttaccaccagacttacgtccactggttccacttgatggtggtcgtttt
gcgacttcagacctgaacgatttatatcgtcgtgtgatcaaccgtaacaaccgtttaaaa
cgcctgcttgatttagcagcaccagacattatcgtacgtaacgaaaaacgtatgttacaa
gagtctgtggatgcgttattagataacggtcgtcgtggtcgtgcgatcacaggttctaac
aaacgtcctctgaaatctttggctgatatgatcaaaggtaaacaaggtcgtttccgtcaa
aacctgttaggtaaacgtgttgactattctggtcgttctgtaatcaccgttggtccatac
ctgcgtctgcatcagtgtggtctgccgaagaaaatggctcttgaattattcaaaccattt
atttacggaaaactggaaacccgtggtttagcgacaacaatcaaagccgctaaaaaaatg
gttgagcgcgaagaagcggttgtttgggatatcttagatgaagttatccgcgaacaccca
gtaatgctaaaccgtgcaccaacacttcaccgtttaggtattcaggcatttgaaccaatc
cttatcgaaggtaaagctattcagttacacccactcgtttgtgcggcatataacgccgac
ttcgatggtgaccaaatggcggttcacgtaccactgacattagaagcacagttagaagct
cgtgcgctgatgatgtcaacaaacaacattctgtctccagcaagtggtgacccaatcatc
gttccttcacaggacgttgtattaggtctgtactacatgactcgtgactgcatcaatgcc
aaaggtgaaggcatggtgttaagtggtcctaaagaagctgaacgcgtttatcgcgcaggt
ttagcctctttacacgcacgcgttaaagtacgtatcactgaagagatcaaagatggcgaa
ggtaacatcaccactgaaactagcttaaaagacacaactgtcggccgagctattttatgg
atgatcgtaccaaaaggcctaccttacgcgctggttaaccaaccattaggtaaaaaagca
atttctaaaatgctgaatacctgttatcgcgtattgggcttgaagccaactgttattttt
gctgaccaaatcatgtataccggttttgcttacgctgcacgttcaggtgcttcagtaggt
atcgatgacatggttatccctgcgaaaaaagcagagatcattgcagaagcagaagcagaa
gttgcagaaattcaggaacagttccaatccggtctggtaacagcgggcgaacgttacaac
aaagttatcgatatttgggctgcggcgaatgagcgcgtagcgaaagcgatgatggaaaac
ctgtctactgaaaccgttattaaccgtaatggtgaagaagaacaacaagtatctttcaac
agcatctttatgatggctgactccggtgctcgtggttctgcagctcagatccgtcagtta
gcaggtatgcgtggtctgatggctaagccagatggctcaatcatcgaaacaccaatcaca
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctcaacccacggtgctcgt
aaaggtcttgcggataccgcactgaaaacagcaaactccggttacttgactcgtcgttta
gttgacgttgcacaagacttagtcgttacagaagacgactgtggtacaaccgaaggtgtt
atgatgactccggttatcgaaggtggtgatgttaaagaaccactgcgtgaacgtgtatta
ggtcgtgtggctgcagaagatattctgaaaccaggtactgccgatattcttgttccacgt
aacaccctgttgaacgaaaaactgtgtgacttgttagaagaaaactctgttgacagcgta
aaagtacgttcagttgtaacctgtaacacagacttcggtgtgtgtgcgaattgttatggt
cgtgaccttgctcgtggtcatatcattaacaaaggtgaagctatcggtgttatcgcagca
cagtcaatcggtgaaccaggtacacagttaacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggcagcagaatctagcattcaagtacgtaacaaaggtactctgaagctg
ttcaatgcgaagttcattactaatactgcgggtaaattagttatcacctctcgtaacaca
gaattacgtttaattgacgaattcggtcgtacgaaagagagctacaaagtgccttacggt
gctcaattagcgaaaggtgatggcgaagcagttaacggtggcgaaactgttgctaactgg
gatccacatacaatgccagttgtgagtgaagtatctggtatcatccgttttgcagacatg
gttgatggtcaaactatcacacgtcaaacagatgaattaacaggtctttcttcactggtt
gttctggattcagcagagcgtacaggtagcggtaaagatttacgtccagcattacgcatc
actgatgcacaaggcaatgacgtattaatcccgaacactgatatgccagcacagtacttc
ctgccaggtaaagcgattgttcagttagacgatggcattgcaattaacgcaggtgacact
ttagcgcgtattccacaagaatctggcggtactaaagatatcaccggtggtctgccacgc
gttgctgacctgtttgaagctcgtcgtccgaaagagcctgcaatccttgctgaaatcagc
ggtattgtttcgttcggtaaagagactaaaggtaaacgtcgtctagttatttctccatta
gacggtagcgatgcatacgaagagatgatccctaaatggcgtcagctcaacgtattcgag
ggtgaggttgtggaacgcggtgatgttatttccgatggtccagaatcaccacacgacatt
ctgcgcttacgtggtgttcatgcggttactcgctatatcactaacgaagtacaggaagtt
taccgtttacaaggcgttaagattaacgataaacacatcgaagttatcgttcgtcaaatg
ctacgtaaagttaccattgagaacgcaggaagctctgagttcctcgaaggtgaacaggtt
gaatacgctcgcgttaaagtatcaaaccgtgttctggaagatgatggcaaagtaccagca
acgtatgctcgtgacctgttaggtatcacgaaagcgtctctggcaacagaatccttcatc
tctgctgcatcgttccaagaaacaactcgtgttctgacggaagctgcggtagcgggtaaa
cgtgatgaattacgtggcttgaaagaaaacgttattgttggtcgcttgatcccagctggt
actggatatgcgtatcaccaagatcgtatgaagcgtcgtcaatcacaattgccgacagat
gaaactgaaacaacaatcagtgctgatgaagcatctgcaaacttagcagaattactgaat
gctggtttcggcggattaaaagactaa
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