Proteus sp. CD3: BTA34_17790
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Entry
BTA34_17790 CDS
T06244
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
prot
Proteus sp. CD3
Pathway
prot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTA34_17790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prot03019
]
BTA34_17790
Enzymes [BR:
prot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BTA34_17790
Messenger RNA biogenesis [BR:
prot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTA34_17790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
PIN_9
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
QEZ94079
LinkDB
All DBs
Position
complement(3965312..3966616)
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AA seq
434 aa
AA seq
DB search
MSKTYLTEKKFSDFALHPKVIEALEKKGFSNCTQIQALTLPITVKGQDIAGQAQTGTGKT
LAFLTSTFHYLLTHPAKEGHETNQPRALIMAPTRELAVQIYSDAKELAQNTGIKMGLAYG
GDGYDEQLKVLSNGVDIVIGTTGRLIDYVKQGHINLSAIQVVVLDEADRMYDLGFIKDIR
WIFRRMPVAAERMNMLFSATLSYRVRELAFEQMNNPEYVEVEPEQKTGFSIKEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCDDIWAHLAADGHRVGLLTGDVPQKKRLRILE
DFTQGNIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGNSGNSISLA
CEEYALNLPAIETYIQHTIPVSKYNSDALLADLPEPKRRHRPRQGQPRRNNAPVRNNRGN
NTQRNNRNKRPSHP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacatatttgacagaaaagaagttttccgacttcgccttgcatccaaaagtg
atagaagcccttgagaaaaaagggttctctaattgtacacaaattcaggcattgacgtta
cctatcactgtgaaaggtcaagacattgccgggcaagcccaaacaggaacaggcaaaacg
ttggcgtttttaacctcaacgtttcattatcttttaacacaccctgctaaagaagggcat
gaaaccaatcaacctcgtgctcttattatggcgccaacacgcgaattagccgtacagatt
tattctgatgctaaagagcttgcgcaaaatacagggattaaaatgggtctcgcctacggc
ggcgatggctatgacgaacaactcaaagtattaagtaatggtgtcgatattgttattggc
acaacaggtcgtttaattgactacgttaaacaaggccatattaaccttagcgcaatccaa
gttgtggtacttgatgaagctgacagaatgtacgatctcggctttattaaagatattcgt
tggattttccgtcgtatgccagttgcggctgagcgtatgaatatgctgttttctgcaacg
ctttcttaccgcgtcagagaactggcttttgagcagatgaataatcctgaatatgttgaa
gttgaacctgaacaaaaaacaggttttagcataaaagaagaactcttttatccttcaaat
gaagagaaaatgcgtcttcttcaaacattaattgaagaagaatggccagatcgttgtatc
attttcgccaatacaaaacaccgttgtgacgatatttgggcgcaccttgctgctgatgga
caccgtgttggtttattaacaggtgatgttcctcagaaaaaacgtctacgcattttagaa
gattttacccaaggtaatattgatattctggttgccactgacgttgccgctagaggtctt
catattccatcagtaacgcatgtttttaactatgatttacctgatgattgtgaagattat
gttcaccgtattggtagaaccggacgtgctggaaatagtggtaattcaatcagccttgca
tgtgaagaatatgcactgaatttacctgcaattgagacttatattcaacatactattcct
gtgagtaaatataatagtgatgcgttattagctgatcttccagagcctaaacgccgtcac
cgtcctcgccaaggtcagcctcgtcgcaataatgcgccggtgcgaaataatagaggaaat
aatactcaacgtaacaaccgaaataaacgcccgagtcatccataa
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