Proteus sp. CD3: BTA34_17970
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Entry
BTA34_17970 CDS
T06244
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
prot
Proteus sp. CD3
Pathway
prot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTA34_17970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prot03019
]
BTA34_17970
03400 DNA repair and recombination proteins [BR:
prot03400
]
BTA34_17970
Enzymes [BR:
prot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTA34_17970
Messenger RNA biogenesis [BR:
prot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTA34_17970
DNA repair and recombination proteins [BR:
prot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BTA34_17970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QEZ94109
LinkDB
All DBs
Position
4001492..4003321
Genome browser
AA seq
609 aa
AA seq
DB search
MSTAEVLNSMPSAQAILRETFGYQQFRPGQQEIIHTITTGRDCLVVMPTGGGKSLCYQIP
ALLLDGLTVVVSPLISLMKDQVDQLCLHGIEAAYLNSTQTREEQFDVQIRCQKGEIKLLY
IAPERLMMESFLHQLVQWKPALLAVDEAHCISQWGHDFRPEYRGIGLLRQYLPDVPIIAL
TATADNTTRYDIINQLVLRDPLIHISSFDRPNIRYTLVEKYKPLDQLWLFIRGQKGKSGI
IYCNSRSKVEETAERLSKRGLSIAGYHAGMEIAQRAKVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAVLFYDPADMAWLRRCLDEKPESDQ
KAIEMHKLNAMGAFAEAQTCRRLVLLNYFDEHRQNACGNCDICLDPPKQYDGLVDAQKAL
SCIYRTGQHFGIGYIVEILKGANNQRIRDSGHDTLPVYGIGKAQSHEHWVSVIRQLIHLG
MVTQNIVHRSALQLTEMARPILRGEVPLQLAVPRLLSPTKSRNQQTKNTHRQYDRKLFAK
LRKLRKSIADEENIPPFVVFNDVTLIEMAEQCPVYPDELLLINGVGQRKLERFGPAFMTL
IRDHIEGFE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacagcagaagttcttaattcaatgccatcagcacaggctattttgcgagaaacc
tttggttatcagcaatttcgccctggtcagcaagaaatcatccataccattacaactggg
agagactgtctcgttgtgatgccaacagggggtggtaaatccctttgttatcaaattccc
gcattattgcttgatgggctaactgtggttgtttcgccacttatctcactgatgaaagat
caggtcgatcaactttgcctgcatggtattgaagccgcttatttaaattcaacccaaacg
cgtgaagagcagtttgatgttcaaatacgttgtcaaaagggtgaaataaaactgctgtat
attgcccctgaacgtttaatgatggagagttttcttcatcaattagtgcaatggaaaccc
gcattactcgctgttgatgaagcacactgtatttcacagtggggacatgattttcgtcct
gagtaccgcggtatagggttattaagacaatatcttcctgatgttcccattattgcactg
acggcaacggcggataatacaacacgttacgatattattaatcagctagtgttgcgtgat
cctttaattcatatcagcagtttcgataggccaaatatccgctacactttagtagagaaa
tacaaaccgcttgatcaactttggttatttattcgcggtcagaaaggaaagtccggcatt
atttactgtaatagccgcagtaaagtcgaagaaaccgcagagcgcctgagtaaacgaggg
ttaagcattgcgggttatcacgcaggaatggaaattgcacaacgagctaaagtacaagaa
gctttccagcgtgatgatttacaaattgtcgttgccacggttgcatttggtatggggatt
aataaacccaatgttcggtttgtggttcattttgatattccgcgaaatattgaatcttat
taccaagaaacagggcgtgcagggcgagatggattgcctgcagaagcagtattattttac
gatcctgccgatatggcgtggttgcgtcgttgtttagatgaaaaaccagaaagcgatcaa
aaagcaattgaaatgcataagcttaatgcgatgggcgcatttgctgaagctcaaacatgc
cgacgcttagtgttactaaattacttcgatgaacatcgacaaaatgcctgtggtaactgc
gatatttgccttgatcctcctaagcaatatgatggtttagtggatgcacaaaaggcattg
tcctgtatttatcgtactggtcagcactttggtattggttatattgttgagattttaaaa
ggtgcgaataatcagcgtattcgagattctggacacgatacattacctgtctatggtatt
gggaaagcgcaaagccatgaacattgggtgagtgtgatccgccagcttattcatttaggt
atggtgacacaaaatattgttcatcgctctgcattacaactgacagagatggcgagaccc
atcttacgtggtgaagtgccattacaattagccgtacctcgattactaagcccgacaaaa
agccgtaatcaacaaacaaaaaatacgcatagacagtacgatagaaaattatttgcgaaa
ctacgtaaattgcgtaagtctattgctgatgaagaaaacatcccgccatttgtcgtcttt
aatgatgtcacattgattgaaatggcagagcaatgccccgtttaccctgatgaattatta
ttaataaacggggttggacaacgaaaattagaacgatttgggccagcgtttatgacactc
attcgtgaccatattgagggcttcgaataa
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