Promicromonospora sp. Populi: AB1046_01635
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Entry
AB1046_01635 CDS
T10796
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
prou Promicromonospora sp. Populi
Pathway
prou03030
DNA replication
prou03430
Mismatch repair
prou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB1046_01635 (dnaE)
03430 Mismatch repair
AB1046_01635 (dnaE)
03440 Homologous recombination
AB1046_01635 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prou03032
]
AB1046_01635 (dnaE)
03400 DNA repair and recombination proteins [BR:
prou03400
]
AB1046_01635 (dnaE)
Enzymes [BR:
prou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB1046_01635 (dnaE)
DNA replication proteins [BR:
prou03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB1046_01635 (dnaE)
DNA repair and recombination proteins [BR:
prou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB1046_01635 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
OB_MCM10
HHH_3
Motif
Other DBs
NCBI-ProteinID:
XDS65167
LinkDB
All DBs
Position
376753..380304
Genome browser
AA seq
1183 aa
AA seq
DB search
MPSAAAEKSADFVHLHVHTEYSMLDGAARIGDLFEEVNRLGQKAIATTDHGYIFGAFDFW
SKAKAAGVKPIIGVEAYITPGTSRFDQKRVRFGQQGQEADDVSARGAYTHMTLLARNNEG
MHNLFRASSLASLEGQMGKWPRMDRDLLERYSAGMTATSGCPSSEIQTRLRLGQWDEAVR
TAGELQDIYGKEHFFVELMDHGLEIETRVTKQLLELSKTIGARLVATNDLHYVREEDSAS
QEALLAINSGSTLDDPNRFKFDGTGYYVKSAAEMRKIFKELPEACDNTLLIAEQCDVSFD
TSANYMPRFPVPAGEDETSWFIKEVEKGLHYRYPGGIPADVRERADYEVGVIVQMGFPGY
FLVVADFINWAKDNGIRVGPGRGSGAGSMAAYAMRITDLDPIPHGLIFERFLNPDRVSMP
DFDIDFDERRRGEVIRYVTEKYGEDRVAQIVTYGTIKAKQALKDSARLLGMPYAMGEKLT
KAMPPAIMGKDISLGGIFDPTDKRYSEAGEFRQVHDTDPEAQRVVELARGIEGLKRQWGV
HAAGVIMSSDPLIDIIPIMRRPQDGAVITQFDYPTSEGLGLIKMDFLGLRNLTILDDALE
NIVNNGKPPLDIEALELTDTATYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAV
LALYRPGPMGVNSHTNYALRKNKQQEITPIHQQLEEPLGEILDGTYGLIVYQEQVMAVAQ
KVAGYTLGEADLLRRAMGKKKRSELEKQQEKFFGGMTERGFSKEAQQTLWNVLESFADYA
FNKAHTAAYGLVSYWTGYLKAHYRTEYMAALLTSVKDDKDKSALYLNECRRMGITVLPPD
VNESLANFAAVGKDIRFGLTAIRNVGANVVVAIIAAREEKGAFTSFQDFLDKVPAVVCNK
RTIESLIKAGAFDSLGHTRRSLLVVHEQAVDSVISVKRKEAEGQFDLFADFGGADEDEAG
MGFSVDIPDLPDWEKKQKLQFEREMLGLYVSDHPLSGLEHVLQRAADTSIAALMADESRP
DGSTVAVAGLLTSVQRKMSKNGNPWAAVTVEDLEGAVEVMFFGETYLAYSTMLAEDQVVV
LRGRVRRRDDTMQLQAMEVALPDITVGSDSPLAVTVPHTRAIEATMVRLREVLATHPGSA
EVHVAVAEPGKRTVVRAADSLRVEKSPALFGDLKALLGQGCLS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgctgccgctgagaagtccgccgacttcgtccacctccacgtccacaccgag
tactccatgctggacggtgcggcgcggatcggggacctgttcgaggaggtcaaccggctc
gggcagaaggcgatcgcgaccaccgaccacggctacatcttcggtgcgttcgacttctgg
tccaaggcgaaggcggccggggtcaagccgatcatcggcgtcgaggcgtacatcacgccg
ggcacgagccggttcgaccagaagcgcgtccggttcggccagcagggccaggaggcggac
gacgtctcggcgcgcggtgcctacacccacatgacgctgctggcccgcaacaacgagggc
atgcacaacctgttccgggcgagctcgctggcctccctcgaggggcagatgggcaagtgg
ccgcgcatggaccgcgacctgctggagcggtacagcgcggggatgacggcgacctcgggc
tgcccgtcgagcgagatccagacgcggctccggctgggccagtgggacgaggcggtccgg
accgccggcgagctgcaggacatctacggcaaggagcacttcttcgtcgagctgatggac
cacgggctggagatcgagacccgggtgaccaagcagcttctcgagctgagcaagacgatc
ggcgcgcggctggtcgccaccaacgacctgcactacgtccgcgaggaggactcggccagc
caggaggccctgctcgcgatcaactcgggctccacgctggacgacccgaaccggttcaag
ttcgacggcaccggctactacgtgaagtcggccgccgagatgcggaagatcttcaaggag
ctgcccgaggcctgcgacaacaccctgctcatcgccgagcagtgcgacgtctcgttcgac
acctcggccaactacatgccgcgcttccccgtcccggcgggggaggacgagacgagctgg
ttcatcaaggaggtcgagaaaggcctccactaccggtaccccggcggcatcccggccgac
gttcgcgagcgggccgactacgaggtcggggtcatcgtccagatgggcttccccggttac
ttcctcgtggtcgccgacttcatcaactgggccaaggacaacgggatccgcgtcgggccg
ggccgtggctccggtgccggctccatggccgcatacgcgatgcggatcacggacctcgac
cccatcccgcacggcctgatcttcgaacggttcctcaacccggaccgggtgtccatgccc
gacttcgacatcgacttcgacgagcgtcggcgcggggaagtcatccggtacgtcacggag
aagtacggcgaggaccgggtcgcgcagatcgtcacctacgggaccatcaaggccaagcag
gcgctgaaggactccgcccgcctgctcggcatgccgtacgccatgggggagaagctcacc
aaggcgatgccgcccgcgatcatgggcaaggacatctccctgggcggcatcttcgacccc
actgacaagcggtactcggaggccggcgagttccgccaggtgcacgacaccgaccccgag
gcgcagcgcgtggtcgagctcgcccggggcatcgagggcctgaagcggcagtggggtgtg
cacgccgccggcgtcatcatgtcgagcgacccgctgatcgacatcatcccgatcatgcgc
cgcccgcaggacggcgcggtcatcacgcagttcgactacccgacgtccgagggcctcggc
ctgatcaagatggacttcctcggcctgcgcaacctcacgatcctcgacgacgcgctcgag
aacatcgtgaacaacggcaagccgccgctcgacatcgaggcgctcgagctgacggacacc
gccacgtacgagctcctcgcgcgcggcgacacgctgggtgtgttccagctcgacggcgga
cccatgcgctcgctcctgcggctcatgaagcccgacaacttcgaggacatctccgccgtc
ctcgccctgtaccgcccgggtccgatgggcgtgaactcgcacacgaactacgccctgcgc
aagaacaagcagcaggagatcacgccgatccaccagcagctcgaagagccgctcggggag
atcctggacggcacctacggcctgatcgtctaccaggagcaggtgatggcggtcgcgcag
aaggtcgccggctacacgctcggcgaggccgacctgctgcgtcgggccatgggcaagaag
aagcgctccgagctggagaagcagcaggagaagttcttcggcggcatgacggagcgcggc
ttctcgaaggaggcccagcagacgctgtggaacgtcctcgagtcgttcgccgactacgcc
ttcaacaaggcgcacaccgccgcctacgggctggtgtcctactggaccggctacctcaag
gcgcactaccgcaccgagtacatggccgcgctgctgacgagcgtcaaggacgacaaggac
aagtcggccctgtacctcaacgagtgccgtcgtatgggcatcacggtgctcccgccggac
gtcaacgagtcgctggcgaacttcgctgccgtcggcaaggacatccggttcggcctcacg
gcgatccggaacgtcggcgccaacgtggtggtcgcgatcatcgccgcccgggaggagaag
ggcgcgttcacgtccttccaggacttcctcgacaaggtgcccgccgtggtctgcaacaag
cgcaccatcgagtccctgatcaaggccggtgcgttcgactcgctggggcacactcggcgc
tcgctgctggtcgtccacgagcaggcggtggactccgtgatcagcgtgaagcgcaaggag
gccgaggggcagttcgacctgttcgccgacttcggtggtgcggacgaggacgaggcgggc
atgggcttctccgtggacatcccggacctgcccgactgggagaagaagcagaagctccag
ttcgagcgcgagatgctcggcctgtacgtgagcgaccacccgctgtccggcctggagcac
gtgctgcagcgggccgccgacacgtcgatagccgccctgatggctgacgagtcccgcccc
gacggctcgacggtggccgtggccggcctgctcacctcggtgcagcgcaagatgagcaag
aacggcaacccgtgggcggccgtgacggtcgaggacctggagggcgccgtcgaggtcatg
ttcttcggtgagacctacctcgcgtactcgacgatgctcgccgaggaccaggtggtggtg
ctgcggggcagggtgcggcgccgcgacgacaccatgcagctgcaggccatggaggtggcc
ctgccggacatcacggtgggctccgactccccgctggccgtgaccgtgccgcacacccgg
gcgatcgaggcgaccatggtgcgcctgcgggaggtgctggccacgcacccagggtcggcg
gaggtccacgtcgctgtggccgagcccggcaagcggacggtggtgagggccgcggacagc
ctgcgcgtggagaagtcgccggcgctgttcggcgacctcaaggcgctcctggggcagggc
tgcctgtcgtga
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