Promicromonospora sp. Populi: AB1046_04525
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Entry
AB1046_04525 CDS
T10796
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
prou Promicromonospora sp. Populi
Brite
KEGG Orthology (KO) [BR:
prou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prou03019
]
AB1046_04525
Enzymes [BR:
prou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AB1046_04525
Messenger RNA biogenesis [BR:
prou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AB1046_04525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
MTR4-like_stalk
DEXQc_Suv3
nSTAND_NTPase5
AAA_22
AAA_30
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XDS65719
LinkDB
All DBs
Position
complement(1003184..1006147)
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AA seq
987 aa
AA seq
DB search
MSDLSPAERYTAYRSQSRSAAQHPELARFRDVVGFQLDEFQVQACEALEQGRAVLVAAPT
GAGKTVVGEFAVHLALASGRKAFYTTPIKALSNQKYADLVRRHGPENVGLLTGDSTINGD
APVVVMTTEVLRNMLYAGSSTLDGLAYVVMDEVHYLADRFRGPVWEEVIIHLSDDVQLVS
LSATVSNAEEFGDWLEMVRGDTAVVVSERRPVPLWQHVLMSSPEPRGKPRLLDLYDGHVD
PTDPGTSPPINPDLSAAFRSGRGGNRPGDHGGPGHRGRGGARGRGRGDRGYRGGNGRRTS
DGPGGGGGIGPSRRTPPRFIVIDALNADALLPAIYFVFSRAGCEAAVDQCLKAGLRLTSP
QEEATIRAIVEARTTALPPEDLEVLGYWAWSQALARGIAAHHAGMLPVFKETVEELFSRG
LVKVVFATETLALGINMPARSVVLDKLVKWDGSSHVPVTPGEYTQLTGRAGRRGIDVEGH
AVVVDHPALDPVALAGLASKRLYPLKSSFRPTYNMAVNLVAQVGRDRAREVLETSFAQFQ
ADRGVVGLAKQAQAHAEALDGYAKAMSCTEGDFGEYMDLRRAIKDREKELSRAVSGARRA
EVVASLEQLRRGDVVEVPSGRRRGYVLVLDPGEPGGFDGPRPTVLTQERQVKKLTLADAP
DGLETVTTVKIPKAFNPRKPDARRDLVSSMRNALGVLADDVPSAHSTSSPVTSAASRAAR
GGTAPTGRRTDAATDAELARLRKALKAHPCHACAERDDHARWAERWNKLKREHDQLVRRV
EGRTGSIARTFDRTLDVLLTLGYLQRTSDQRTADQRIRVTDDGRWLRRLYAENDLLLAEC
LRRGVWDGLDPAGLAAVVSTVVYQGRRDDAPDPYIPGGPTGRLGVVLDATQRVWSEVDDL
EEAHGIEATGALDLGLVGAMYRWASGKGLDSVLRGSDLAAGDFVRWCKQVIDVLDQLGGA
APSEKLRSTARKAQDAVLRGVVAYSSL
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctgagccccgccgagcggtacacggcataccggtcacagagccgttcagcg
gcccagcaccccgagctggcccgcttccgggacgtcgtcgggttccagctcgacgagttc
caggtgcaggcctgcgaggccctcgaacagggccgcgccgtgctcgtggcggcccctacc
ggggcaggcaagaccgtggtgggcgagttcgccgtccacctggccctcgcgtccggccgc
aaggcgttctacacgacgccgatcaaggccctgtccaaccagaagtacgccgacctcgta
cgccggcacgggcctgagaacgtcggcctgctcacgggcgactccacgatcaacggcgac
gcaccagtggtggtcatgaccaccgaggtgctgcgcaacatgctctacgccgggtcgtcc
accctggacgggctcgcctacgtggtcatggacgaggtgcactacctcgccgaccgcttc
cgcggccccgtctgggaagaggtcatcatccacctctccgacgacgtgcagctcgtctcc
ctgagcgcgacggtgtccaacgccgaggagttcggcgactggctcgagatggtgcgcggc
gacaccgccgtcgtcgtctccgaacgccggcccgtacccctgtggcagcacgtcctcatg
tcctccccggagccgcgcggcaagccccgcctcctggacctgtacgacgggcacgtcgac
ccgaccgaccccggcaccagcccgcccatcaaccccgacctgtccgccgcgttccggtcc
ggacgaggcggcaaccgccccggcgaccacggcggccccggccaccggggccgcggcggc
gcccgcggacgcggacgaggcgaccgcgggtaccgcggcggaaacggccgccgcaccagc
gacggccccggcgggggcggtggcatcgggccgagccgacgcaccccgccgcgattcatc
gtcatcgacgccctcaacgcggacgccctgctgcccgcgatctacttcgtgttctcccgc
gcgggctgcgaagccgccgtcgaccagtgcctcaaggccgggctgcgcctgaccagcccg
caggaggaagccacgatccgcgccatcgtcgaggcacgcaccaccgcgctgccgcccgag
gacctcgaagtgctcggctactgggcctggtcacaggccctggcccgaggcatcgccgcc
caccacgccggcatgctgcccgtgttcaaggagaccgtcgaggagctgttctcgcgcggc
ctggtcaaggtcgtgttcgccaccgagaccctcgcgctcggcatcaacatgcccgcccgg
tccgtggtcctggacaagctcgtcaagtgggacggctccagccacgtcccggtcacgccc
ggggagtacacccagctcaccggccgcgccgggcgccgcggcatcgacgtcgagggccac
gccgtcgtcgtcgaccaccccgccctggacccggtggcgctggccggcctcgcgtccaag
cgcctgtacccgctcaagtccagcttccggcccacctacaacatggccgtcaacctcgtc
gcccaggtcggccgcgaccgcgcccgcgaggtcctggagacgtcgttcgcgcagttccag
gccgaccgcggcgtcgtcggcctcgccaagcaggcccaggcacacgccgaggccctcgac
gggtacgccaaggccatgagctgcaccgaaggcgacttcggcgagtacatggacctgcgc
cgcgccatcaaggaccgcgagaaagagctctcccgcgcggtgtccggcgcccgccgcgcc
gaggtcgtcgcctccctggaacagctgcgccgcggcgacgtcgtcgaggtgccgtccggg
cggcggcgcgggtacgtcctcgtgctcgaccccggcgagcccggcggcttcgacggaccc
cgccccacggtcctgacccaggaacgccaggtcaagaagctcaccctcgccgacgcgccc
gacgggctggagaccgtcaccaccgtcaagatccccaaggcgttcaacccccgcaagccc
gacgcacgccgcgacctcgtctccagcatgcgcaacgccctaggcgtcctggccgacgac
gtcccctcggcgcactccacgagcagccccgtgaccagcgccgcgagccgagccgcccgc
ggcggcaccgcccccactggacgccgcacggacgccgccaccgacgccgagctcgcccgc
ctgcgcaaggccctcaaggcacatccctgccacgcctgcgccgaacgcgacgaccacgcc
cgctgggcggagcgctggaacaagctcaagcgcgagcacgaccagctcgtccgccgcgtc
gaaggacgcaccggctccatcgcccgcaccttcgaccgcaccctcgacgtgctgctgacc
ctcggctacctccagcgcacctcagaccaacgcaccgctgaccaacgcatccgcgtcacc
gacgacggccgctggctgcgccgcctctacgccgagaacgacctcctgctggccgagtgc
ctgcgccgcggcgtgtgggacgggctcgacccggcggggctggccgccgtcgtctccacc
gtcgtctaccaggggcggcgcgacgacgcccccgacccgtacatccccggcggcccgacc
gggcgcctcggagtcgtcctggacgccacgcagcgcgtgtggtccgaggtcgacgacctc
gaggaagcgcacggcatcgaggccaccggggcgctcgacctgggcctggtcggcgcgatg
taccggtgggcgtccggcaagggcctggacagcgtgctgcgcggctctgacctggccgcg
ggtgacttcgtgcggtggtgcaagcaggtcatcgacgtcctggaccagctcggcggcgcc
gcgccgtccgagaagctgcgctcgaccgcccgcaaggcgcaggacgcggtcctgcgcgga
gtcgtggcgtactccagcctctga
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