Promicromonospora sp. Populi: AB1046_10935
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Entry
AB1046_10935 CDS
T10796
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
prou Promicromonospora sp. Populi
Pathway
prou03018
RNA degradation
Brite
Enzymes [BR:
prou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AB1046_10935
Messenger RNA biogenesis [BR:
prou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB1046_10935
Ribosome biogenesis [BR:
prou03009
]
Prokaryotic type
rRNA processing factors
AB1046_10935
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDS67161
LinkDB
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Position
complement(2384982..2388926)
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AA seq
1314 aa
AA seq
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MGSQDDHDAPEAVAQVTTGGEAPADTTPVKRPRRRATRSVVSTATVEPIVVGSAATTEAQ
PVTTGGTAAVATSATAAASEPATKRPRRRATRGISSPTAPSPVAAEPTPVPAAELAPVSE
PSLIETNVTAEAAPVVESEVVEPEVVEPELAAEPELAPEPTIVPEPTPVPEFEVEPEPAA
AESAPLDIVLPEPVVTTDAPVHEVASLDDIILPGGPTADGEKAAPKRRTRKRAEPVSAAP
AVETADEPEAPKRARSRRKPASTEPVVEQAAEPTSVEESPVAAATDSFVTDSFVTDSFVT
DSFVTDSFGAETPAAPAEQAPKTRARRSRRSTSEPFEVPVAETPDAPAQPAASTASTTSG
TRVPRLATTALLFQAPDDSARRSRRAQAPAGPPRPQDLTPQFARPVARAVEPVAETPAPA
AEVAPPAPRAAEAKAPARTRPEAQAEARTESRTEAPAEPRARRSGSRRAVRRTGEPAARP
DVQDTEDAWQAAPAVESPADFATQEPAVEADAPEADAPETDDWAVPQFLAVELSEDDIAA
ADEVEAIEEELAAEGIELEELAPADFEEYDDEDVRPSRRRRRRGGRGRRGGRANRSDDMD
DSADEDQDDDSEEDAQASDDEDGDVEGDAEDSAQDAGDGEGGSRRRRRRRRGTRGERAEA
AAVRSSRSDAGRGDLVRSDEVTALKGSTRLEAKRQRRREGRDHGRRRQIITEAEFLARRE
SVQRSMIVREKDGRTQIAVLEDGVLVEHYVSQQSQASMAGNVYLGRVQNVLPSMEAAFVD
VGKGRNAVLYAGEVNWDAAGLEGQPRRIEQALKSGDSVLVQVTKDPIGHKGARLTSQVTL
AGRYLVFVPGGGMTGISRKLPDTERSRLKKILREVVPEGAGVIVRTAAEGASEDELRADV
ERLQGQWDAIQAKAKKANAPALLQGEPDMAIRVVRDIFNDDFSSLVVQGEGAWDEIAHYV
EELAPDLRERVSKWAENTDVFHVHRVDEQLAKGMDRKVWLPSGGSLVIDRTEAMTVVDVN
TGKFTGAGGTLEETVTRNNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLESNRDLVLRRLV
ECLGRDRTKHQVAEVTSLGLVQMTRKRVGQGLVEAFSETCEHCKGRGFIVHDEPIEKSGN
GVGSGSAPAVSDEGPRSARTRRKRGKEKSASLEPVAPVASLPEERSEAREAVKATLATIA
AAAQHAHETKDPVDDGPATLDEIQLPTGGSPSGSAGSPTSAGSPGFSGSPETADAPDALI
AAVPSTDDAPSSNGELSSNDAQSSSDAPSANEAPEGGSGTGQPEPPKGAGDEVA
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atcgggtcacaggatgatcacgacgcacctgaggcagtcgcccaggtcaccactggtggg
gaggctccggcagatacgacgccggtcaagcgcccgcgtcgcagggccacccggtccgta
gtttctacggccaccgtcgagcccatcgtcgtcggatccgccgctaccaccgaggcccag
cccgtgaccaccggcggtaccgccgccgttgccacgtccgccaccgccgcggcgagcgag
ccggccaccaagcgcccgcgtcgccgggcgacgcgtggcatctcttcgcccacggctccc
agccctgtcgctgccgagccgacgccggtgcctgccgccgagctcgccccggtgagcgag
ccgagcctgatcgagaccaatgtcacagccgaggccgctccggtcgtcgagtcggaggtc
gtcgagcccgaggttgtcgagcctgagctcgctgccgagcctgagctcgcgcccgagccg
acgatcgtgcctgagccgacgcccgtgcccgagttcgaggtcgagcccgagcccgccgcc
gcggagtccgctccgctcgacatcgtgctcccggagcccgtggtgaccaccgacgccccg
gtccacgaggtcgccagcctcgacgacatcatccttcccggcggtccgacggcggacggc
gagaaggccgccccgaagcgtcgtacccgcaagagggcggagccggtttcggcggcgccc
gcggtcgagacggccgacgagccggaagcgcccaagcgcgcgcgctcgcgccgcaagccc
gcctcgaccgagccggtcgtggagcaggcggccgagccgacgtcggtcgaggagagcccg
gtggcggctgccaccgactcgttcgtcaccgactcgttcgtcaccgactcgttcgtcacc
gactcgttcgtcaccgattcgttcggcgccgagacgcccgccgccccggccgagcaggcc
ccgaagacccgcgcgcgccgaagccgtcgttcgacgtcggagccgttcgaggtccccgtg
gccgagacgcccgacgcacccgcgcagcccgcggcgtcgaccgcctcgaccacctcgggc
acgcgcgttccgcggctcgccacgacggcgctgctcttccaggcgcccgacgactcggcc
cgccgctcgcggcgcgcacaggctcccgccgggccgccgcgtccgcaggacctgacgccg
cagttcgcccgcccggtcgcccgcgccgtcgagcctgtcgccgagacgcccgcgcccgcc
gcagaggttgcgccgccggctccccgggccgccgaggccaaggcgcccgcgcggacccgg
cccgaagctcaggcagaggccaggacggaatccaggacagaggcccccgccgagcccagg
gcccgccgttccggttctcgccgggccgtgcgtcgcacgggcgagcccgccgctcgaccc
gacgtccaggacaccgaggacgcctggcaggctgcaccggccgtcgagtcgccggccgac
ttcgccactcaggagcccgccgtcgaggcggacgcccccgaggctgacgcccccgagact
gacgactgggcagtaccgcagttcctcgctgtcgagctgagcgaggacgacatagctgcc
gcggacgaggtcgaggcgatcgaggaggagctggccgccgagggcatcgagctcgaggag
ctcgccccggccgacttcgaggagtacgacgacgaggacgtgcgcccgtcgcgccgtcgt
cgtcgtcggggcggacgaggccgccgtggcggccgtgcgaaccgctcggacgacatggac
gactcggccgacgaggaccaggacgacgactccgaggaggacgcgcaggcgtccgacgac
gaggacggcgacgtcgagggcgacgccgaggactcggcccaggacgcaggcgatggggag
ggcggcagccgccgccgtcgccgtcgtcgccggggtacacgcggcgagcgcgccgaggcc
gccgccgtccgctcgagccggagcgacgccggccggggcgacctggtccgtagcgacgag
gtcaccgcgctcaagggctccacgcgcctcgaggcgaagcgtcagcgccgccgcgagggc
cgcgaccacggtcgccgccgccagatcatcaccgaggccgagttcctggcgcgccgcgag
tcggtgcagcggtcgatgatcgtgcgcgagaaggacggccgcacgcagatcgccgtgctg
gaggacggtgtgctcgtggagcactacgtctcgcagcagtcgcaggcgtcgatggccggc
aacgtgtacctgggccgggtccagaacgtgctgccctccatggaggccgcgttcgtcgac
gtcggcaagggccgcaacgccgtgctgtacgcgggcgaggtcaactgggacgccgcgggt
ctggaaggtcagccgcgccggatcgagcaggcgctgaagtcgggcgactccgtcctggtg
caggtcaccaaggacccgatcggccacaagggtgcccggctcacgagccaggtcacgctc
gccggccggtacctggtgttcgtgccgggtggcggcatgaccgggatcagccgcaagctg
cccgacaccgagcggtcgcgcctcaagaagatcctccgcgaggtggtccccgagggtgcg
ggcgtcatcgtgcgtaccgccgccgagggggcgagcgaggacgagctgcgcgccgacgtc
gagcgtctgcaggggcagtgggacgccatccaggccaaggccaagaaggcgaacgccccg
gcgctgctgcagggcgagcccgacatggccatccgtgtggtccgcgacatcttcaacgac
gacttctcgtcgctggtggtgcagggcgagggtgcgtgggacgagatcgcgcactacgtc
gaggagctcgctcccgacctgcgtgagcgtgtgtccaagtgggccgagaacaccgacgtg
ttccacgtgcaccgcgtggacgagcagctcgccaaggggatggaccgcaaggtctggctg
ccctcgggcggctcgctggtcatcgaccgcaccgaggccatgacggtcgtggacgtcaac
accggcaagttcaccggtgcgggcggcacgctcgaggagaccgtcacgcggaacaacctc
gaggcggccgaggagatcgtgcggcagcttcgcctgcgcgacatcggcggcatcatcgtc
atcgacttcatcgacatggtgctcgagtccaaccgtgacctggtgctgcgccggctggtc
gagtgcctcggccgggaccgcaccaagcaccaggtggcggaggtgacctcgctcggcctg
gtccagatgacgcgcaagcgtgtgggccagggcctcgtcgaggcgttctccgagacgtgc
gagcactgcaagggccgcgggttcatcgtgcacgacgagcccatcgagaagtcgggcaac
ggcgtgggctccggcagcgcgccggcggtgtccgacgagggcccgcgttccgcgcggacg
cgccgcaagcgcggcaaggagaagtcggcttcgctggagccggtggctccggtcgccagc
ctgcccgaggagcggtccgaggcccgcgaggccgtcaaggccacgctcgccacgatcgcc
gccgcggcgcagcacgcgcacgagacgaaggatcccgtggacgacggccccgcgaccctc
gacgagatccagctgcctaccgggggatcgccgtccggctccgccggttcgccgacgtcg
gccgggtcgcccggcttctctggttcgccggagacggcggacgcgcctgacgcgctgatc
gccgccgtgccgtcgacggatgacgcgccgtcgtcgaacggtgaactgtcgtcgaacgat
gcacagtcgtcgagcgatgcaccgtcagcgaacgaggcgccggaggggggctccggcact
gggcagccggaaccgcccaaaggagctggcgacgaggtcgcctga
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