Promicromonospora sp. Populi: AB1046_12185
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Entry
AB1046_12185 CDS
T10796
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
prou Promicromonospora sp. Populi
Pathway
prou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB1046_12185 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prou03021
]
AB1046_12185 (rho)
03019 Messenger RNA biogenesis [BR:
prou03019
]
AB1046_12185 (rho)
Transcription machinery [BR:
prou03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AB1046_12185 (rho)
Messenger RNA biogenesis [BR:
prou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB1046_12185 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
XDS62698
LinkDB
All DBs
Position
complement(2689212..2691149)
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AA seq
645 aa
AA seq
DB search
MTDTTENAASATGRTAGSLSGMRLAELQALAGDLGVKGTSRMRKSDLVDTIREKTGGATK
RPVRAASAVELPANNDISARAEVPVAAAEVATSGVRADASTDADKAARLAQLADAVAAPR
EQGAGRRSGRGQAAPEGAEKAGEDKGRNGQSVNGRQSARGANAERGNTRTADRTADRTAD
RTAERTADRNVERTTDRTADRNAAELEEDRNSRRRRGRDRGRDRKRGRGRQGPDVAGLEN
VEVRDDDVLLPVAGILDILDNYAFVRTSGYLPGNNDVYVSLNQVKKGGLRRGDAVVGAVR
QPRDGEEPPPQPAGTKNSRVNKFNALVRLDSVNGMTPEEARERPEFTKLTPLYPQERLRL
ENPEATKLTPRVIDIVAPIGKGQRGLIVAPPKAGKTLMMQQIANAISLNNPEVHLMVVLV
DERPEEVTDFERSVKGEVISSTFDRHASDHTLVAELAIERAKRLVELGQDVVVLLDGITR
LSRAYNLAAPASGRILSGGVDAAALYPPKKFFGAARNIEDGGSLTILATALVETGSKMDE
VIFEEFKGTGNMELRLSRSLAEKRIFPAIDVNGSSTRREEILMSKDELAIVYKLRRVMGA
LDQTQAAELLLGQLKKTKTNVEFLLHVQKTTPGGLTEDENVGETV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacaccacagaaaacgctgcttcagctaccggccgtacggccggatcgctgagc
ggcatgcgcctcgccgagctccaggcactcgccggagaccttggcgtgaagggcacctcc
aggatgcgcaagagcgacctcgtggacacgatccgcgagaagacgggcggcgcgacgaag
cgtcccgtccgtgccgcctccgccgtggagctgcccgcgaacaacgacatttccgcccgt
gccgaggtgccggtcgctgccgccgaggtcgccacctcgggtgtgcgcgccgacgcgagc
acggatgccgacaaggccgctcgcctggcccagctcgccgacgccgtcgccgccccgcgt
gagcagggtgccggacgccgctccggccgcggccaggctgcccccgagggcgccgagaag
gccggcgaggacaagggccgcaacggccagtccgtcaacggccggcagagcgcgcgcggt
gccaacgcggagcggggcaacacccggaccgccgaccgtactgccgaccgtactgccgac
cgcaccgcggagcgcaccgccgaccggaacgtggagcgcaccaccgaccggaccgcggac
cgcaacgccgccgagctcgaagaggaccgcaactcgcgccgccgtcgcggccgggaccgg
ggccgggaccgcaagcgcggccgcggtcgccaggggccggacgtcgcgggtctcgagaac
gtcgaggtgcgtgacgacgacgtgctgctgcccgtcgccggcatcctcgacatcctcgac
aactacgcgttcgtgcggacctcgggctacctgccgggcaacaacgacgtgtacgtgtcg
ctgaaccaggtcaagaagggcggcctccgccgcggcgacgccgtcgtcggcgccgtccgc
cagccgcgcgacggcgaagagccgccgccccagccggccggcaccaagaactcccgcgtg
aacaagttcaacgccctggtgcgcctggactccgtgaacggcatgacgccggaggaggcg
cgcgagcgccccgagttcaccaagctgacgccgctgtacccgcaggagcgcctgcgtctg
gagaacccggaggcgaccaagctcacgccccgcgtgatcgacatcgtcgccccgatcggc
aagggccagcgcggcctcatcgtcgcgccgcccaaggccggcaagacgctgatgatgcag
cagatcgccaacgcgatctcgctcaacaaccctgaggtccacctcatggtcgtgctggtg
gacgagcggccggaagaggtcaccgacttcgagcgctcggtcaagggcgaggtcatctcc
tcgacgttcgaccgccacgcttccgaccacacgctggtcgcggagctcgcgatcgagcgc
gccaagcgcctcgtggagctgggccaggacgtcgtggtgctgctcgacggcatcacccgc
ctgtcgcgcgcctacaacctggccgccccggcgtcgggccgcatcctgtccggtggtgtg
gacgccgccgcgctctacccgcccaagaagttcttcggcgccgcccgcaacatcgaggac
ggcggctcgctgaccatcctcgcgacggccctggtcgagaccggctcgaagatggacgag
gtgatcttcgaggagttcaagggcaccggaaacatggagctgcggctctcgcggtccctg
gccgagaagcgcatcttcccggcgatcgacgtcaacggctcgagcacccggcgcgaggag
atcctcatgtcgaaggacgagctcgcgatcgtctacaagctgcgccgcgtcatgggcgcg
ctcgaccagacccaggcagccgagctgctgctcgggcagctcaagaagaccaagaccaac
gtcgagttcctgctgcacgtgcagaagacgacgccgggcggtctgacggaggacgagaac
gtgggcgagaccgtctga
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