Promicromonospora sp. Populi: AB1046_14030
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Entry
AB1046_14030 CDS
T10796
Name
(GenBank) DNA repair helicase XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
prou Promicromonospora sp. Populi
Pathway
prou03420
Nucleotide excision repair
Brite
Enzymes [BR:
prou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB1046_14030
Transcription machinery [BR:
prou03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AB1046_14030
DNA repair and recombination proteins [BR:
prou03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AB1046_14030
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDS63040
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Position
3110019..3111716
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AA seq
565 aa
AA seq
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MPDGPLIVQSDKTLLLEVDHPSAELARRSIAPFAELERAPEHVHTYRLTALGLWNARAAG
HDAEQVVSTLLEFSRYPVPHALLVDVAETMARYGRLQLVQDPAHGLVLRTTDRAVLAEVL
KSRRTAGLVGERLDESTVLVHPSERGHLKQVLLKLGWPAEDLAGYVDGEKHPIELNHTTE
PRTPNEQAATWELRPYQAQAVDGFWHGGSGVVVLPCGAGKTIVGAGAMAKSGTTTLILVT
NTVSARQWRDELVRRTSLTEDEIGEYSGARKEIKPVTIATYQVLTTKRKGVYTHLELLDA
RDWGLVLYDEVHLLPAPVFRMTADLQARRRLGLTATLVREDGREDEVFSLIGPKRFDAPW
KDIEAQGYIAPADCVEVRLTLPESERMTYATAELEDKYRLAASASGKKKVVEQIVARHPD
DQVLVIGQYLDQLEELAEHLGAPIITGATTNKERQRLFGAFREGEISRLVVSKVANYSVD
LPEASVAIQVSGSFGSRQEEAQRLGRIMRPKADGRTAHFYAVVARDTVDQDFAAHRQRFL
AEQGYAYRILDAEDLDGSPADSPAP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacggcccgttaatcgtgcagagcgacaagacgctcctgctggaggttgaccac
ccgagcgccgagctggcgcgccgctcgatcgcgccgttcgccgagctggagcgtgcgccc
gagcacgtgcacacctaccgcctcacggcgctgggcctgtggaacgcgcgcgcggccggc
cacgacgcggagcaggtggtgagcacgctgctggagttcagccgctacccggtgccgcac
gcgctgctggtcgacgtcgccgagacgatggctcgctacgggcgcctccagcttgtacag
gacccggcgcacggcctcgtgctgcgcaccaccgaccgggcggtccttgcggaggtgctg
aagtcgcggcgcaccgcgggcctggtcggcgagcggctggacgagtccacggtcctggtg
cacccctccgagcgcggccacctcaagcaggtcctgctcaagctcggctggccggccgag
gacctcgcaggctacgtcgacggcgagaagcacccgatcgagctgaaccacaccaccgag
ccgcgcaccccgaacgagcaggcggccacctgggagttgcggccgtaccaggcgcaggcc
gtggacggtttctggcacggcggctcaggcgtcgtggtgctgccctgcggcgccggcaag
acgatcgtgggcgccggcgcgatggcgaagtcgggcacgacgacgctcatcctggtcacc
aacaccgtcagcgcgcgccagtggcgcgacgagctggtgcgccgcacgagcctcaccgag
gacgagatcggcgagtactccggcgcccgcaaggagatcaagccggtcacgatcgcgacc
taccaggtgctcaccaccaagcggaagggcgtctacacgcacctcgagctgctcgacgcc
cgcgactggggcctcgtcctgtacgacgaggtgcacctgctcccggccccggtcttccgg
atgacggcggacctccaggcccgacgccggctcggcctgaccgccacgctggtgcgggag
gacggccgcgaggacgaggtgttcagcctgatcgggcccaagcggttcgacgcgccgtgg
aaggacatcgaggcgcagggctacatcgcgcccgccgactgcgtcgaggtccggctcacg
ctcccggagagcgagcgcatgacgtacgcgacggccgagctggaggacaagtaccggctc
gccgcatcggcgtcgggcaagaagaaggtggtggagcagatagtggcgcgccacccggac
gaccaggtgctcgtcatcgggcagtacctcgaccagctcgaggagctggccgagcacctc
ggtgcgccgatcatcaccggggcgaccacgaacaaggagcggcagcggctgttcggcgcg
ttccgtgagggcgagatctcgcgcctcgtggtgagcaaggtcgccaactactcggtggac
ctgccggaggcgtcggtggcgatccaggtgtcggggtccttcgggtcgcggcaggaggag
gcgcagcgcctcggccgcatcatgcggcccaaggcggacggccgcaccgcgcacttctac
gcggtggtcgcgcgggacaccgtggaccaggacttcgcggcccaccgccagcggttcctg
gccgagcaggggtacgcgtaccggatcctggacgccgaggatctggacgggtcgccggcc
gattccccggccccctga
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