Promicromonospora sp. Populi: AB1046_18435
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Entry
AB1046_18435 CDS
T10796
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
prou Promicromonospora sp. Populi
Brite
KEGG Orthology (KO) [BR:
prou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prou03032
]
AB1046_18435 (topA)
03400 DNA repair and recombination proteins [BR:
prou03400
]
AB1046_18435 (topA)
Enzymes [BR:
prou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB1046_18435 (topA)
DNA replication proteins [BR:
prou03032
]
Prokaryotic type
DNA Topoisomerases
AB1046_18435 (topA)
DNA repair and recombination proteins [BR:
prou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB1046_18435 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
MgtS-like
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
XDS63861
LinkDB
All DBs
Position
4076845..4079658
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AA seq
937 aa
AA seq
DB search
MSQARKLVIVESPTKARKIQSYLGDDYEVEASVGHIRDLPQPKDLPAEMKKGPYGKFSVD
VDNGFDPYYVVHSDKKKKVSELKKALKEADELFLATDEDREGEAIAWHLIQELKPKVPVK
RMVFHEITRDAILRALENTRELDQDLVDAQETRRILDRLYGYEVSPVLWRKVRQGLSAGR
VQSVATRLVVERERERMAFVSADYWDVAGTFAVAPDGGAAASGQPSFRARLTQLAGDKVA
SGRDFDDRGRLKVRTGVRQLDEATANAVVSGLAAADFAVRSLETKPYTRRPAAPFTTSTM
QQEAGRKLRMSSRQAMRTAQGLYENGYITYMRTDSPSLSKEATDAARRQAAELYGPEYVP
GAPRLYQSKSKGAQEAHEAIRPAGDSFRTPAQVASELSGDQFRLYELIWKRTVASQMADA
KGSTASVRLGAVVVGGAQDGNEAVFSASGTVISFRGFLAAYEESADADAEQSEGAAAKEA
RLPTMSEGDALVGTDLAADGHSTAPPARYTEASLVKALEERGIGRPSTYAATISTIQDRG
YVITRGQALVPTWLAFAVIRLLEEHFDRLVDYDFTATMEADLDQIAAGSRDRVAWLREFY
FGEAPGNIGTSDPLGVDSDGGGLRALVANLGEIDAAAINSVDIGEGIRVRVGRYGPYIED
LAAEVEEGKTPPRASVPDDVAPDELTVAKARELLAAGADDGRVLGQHPESGNPIVAKNGR
YGPYVTEQMPEPELDPDLSAAAKKRALAALPKPRTASLLKTQALDSVTLEDALQLMSLPR
VVGVDPESGEEITAQNGRYGPYLKKGTDSRTLPSEEAMFTVTLDEAVEIYKQPKRGRGRT
ATPPLRELGDDPNSGKPIQVKDGRFGAYVTDGETNRTLPRDVTPESITAERAIELLAEKR
AQGPAKKRTTRTTTAKKPAAKKAPAKKAPAKKASTAK
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggcacgcaagctcgtgatcgtcgagtcgcccaccaaggctcgcaagatccag
agctatctcggcgacgactacgaggtcgaagccagtgtcgggcatattcgcgacctcccg
cagcccaaggacctgcccgcggagatgaagaagggtccgtacggcaagttctccgtggac
gtcgacaacgggttcgacccgtactacgtcgtgcactcggacaagaagaagaaggtcagc
gagctcaagaaagcgctcaaggaagccgacgagctcttcctcgccaccgatgaggaccgc
gagggcgaggccatcgcctggcacctgatccaggagctcaagcccaaggtcccggtcaag
cgcatggtgttccacgagatcacccgggacgcgatcctccgggcgctggagaacacgcgg
gagctcgaccaggacctcgtggacgcccaggagacgcgacgcatcctcgaccgcctgtac
ggctacgaggtctcgccggtgctgtggcgcaaggtgcggcagggcctgtccgccggccgg
gtgcagtccgtggcgacccggctcgtggtcgagcgcgagcgcgagcgcatggcgttcgtc
tcggcggactactgggacgtggcgggcaccttcgcagtggcgcccgacggcggcgcggcc
gcctccggccagccctccttccgcgcccggctcacccagctcgctggcgacaaggtcgcc
tcgggccgcgacttcgacgaccgggggcggctcaaggtccgcaccggcgtgcggcagctc
gacgaggcgaccgcgaacgccgtcgtctccgggctggcggctgccgacttcgccgtccgc
agcctggagaccaagccctacacgcggcgccccgccgcgccgttcaccacctccacgatg
cagcaggaggcgggccgcaagctgcggatgtcgtcgcgccaggcgatgcgcaccgcgcag
ggcctgtacgagaacggctacatcacctatatgcgtaccgacagcccttccctctcaaag
gaggcgacggacgccgcgcgccggcaggccgccgagctgtacgggcccgagtacgtgccg
ggcgctccccgcctgtaccagtccaagtcgaagggcgcccaggaggcgcacgaggcgatc
cgccccgcgggtgactccttccgtaccccggcgcaggtcgccagtgagctgagcggcgac
cagttccgtctgtacgagctgatctggaagcgcacggtggcctcccagatggccgacgcg
aagggctcgacggcttcggtccggctcggggccgtcgtcgtgggcggtgcgcaggacggc
aacgaggcggtgttctcggcgtcgggcacggtgatctcgttccgtggcttcctcgcggcc
tacgaggagagcgcggacgccgacgccgagcagagcgagggcgcggcggccaaggaggcg
cgcctgccgacgatgtcggagggcgacgcgctggtcggcaccgacctcgccgcggacggc
cactcgacggcgccgcctgcccgctacacggaggcgtccctcgtcaaggcgctggaggag
cgcggcatcggccgcccgtccacctacgccgcgacgatctcgaccatccaggaccgcggc
tatgtcatcacgcgtggccaggcactggttccgacgtggctcgcgttcgcggtgatccgc
ctcctggaggagcacttcgaccggctcgtcgactacgacttcacggccacgatggaggcc
gacctcgaccagatcgccgcggggtcgcgggaccgggtcgcctggctgcgcgagttctac
ttcggcgaggccccgggcaacatcggcacgtccgacccgctcggcgtcgacagcgacggc
ggcggtctccgcgcgctcgtggcgaacctcggcgagatcgacgccgcggcgatcaactcc
gtggacatcggcgagggcatccgggtgcgcgtgggccgctacggcccgtacatcgaggac
ctcgcggccgaggtcgaggagggcaagactccgcctcgcgcctccgtgccggacgatgtc
gcgcccgacgagctgaccgtcgccaaggcccgcgagctgctcgcggccggggccgacgac
ggccgtgtgctcggccagcacccggagtcggggaacccgatcgtggcgaagaacggccgc
tacggcccgtacgtgacggagcagatgcccgagccggagctcgaccctgacctgtccgcc
gccgcgaagaagcgggcgctggccgccctgcccaagccgcggacggcgtcgctgctcaag
acgcaggccctcgactcggtgacgctcgaggacgccctgcagctcatgtcgctgccgcgc
gtcgtgggtgtggacccggagtccggggaggagatcaccgcgcagaacggtcgctacggc
ccgtacctgaagaagggcacggactcgcgcaccctgccgtccgaggaggccatgttcacg
gtcaccctggacgaggccgtggagatctacaagcagcccaagcggggccgcggacgtacc
gcgacgccgccgctgcgcgagctcggggacgacccgaacagcggtaagccgatccaggtc
aaggacggccggttcggcgcgtacgtgaccgacggcgagaccaaccgcaccctgccgcgc
gacgtcacgccggagtcgatcaccgcggagcgagcgattgagctgctcgcggagaagcgc
gcccagggcccggcgaagaagcgcaccacccggacgacgacggccaagaagccggcggcg
aagaaggccccggccaagaaggctccggcgaagaaggcatcgaccgccaagtag
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