Promicromonospora sp. Populi: AB1046_20840
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Entry
AB1046_20840 CDS
T10796
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prou Promicromonospora sp. Populi
Pathway
prou03420
Nucleotide excision repair
prou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB1046_20840
03430 Mismatch repair
AB1046_20840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prou03400
]
AB1046_20840
Enzymes [BR:
prou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB1046_20840
DNA repair and recombination proteins [BR:
prou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB1046_20840
MMR (mismatch excision repair)
Other MMR factors
AB1046_20840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
SAM_GIDA_C
PrkA
Motif
Other DBs
NCBI-ProteinID:
XDS64320
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All DBs
Position
4612536..4614599
Genome browser
AA seq
687 aa
AA seq
DB search
MLTQTNSVGGPNHPGPLSPDAILTALDPEQREVALALNGPVVVLAGAGTGKTRAITHRIA
YGVRIGAYKPSSVLAVTFTARAAGEMRTRLRELGVQGVQARTFHAAALRQLGYFWPRIVG
GAPPRLQEYKAQLVAEAARRLGLSVDRVAVRDLSSEVEWAKVSLITADDYEKAAQAVGRE
APSGYDGQTVSRLITAYEEAKTERGVIDFEDVLLMLGDMLNSHKAVADEVRSQYRHFVVD
EYQDVSPLQQFLLDQWLGGRRELCVVGDPSQTIYSFTGASPRHLLQFRRTYPEAQEIRLV
RDYRSTPQVVNLANEVLKRAGREGGAHQALELVAQRRPGPPTAFTAYDDDEAEAKGIATR
AARLIQSGIKPSEIAVLYRTNAQSEAFEAAFADAGVGYLVRGGQRFFQRKEVRDAILLLR
GAARSADPELPMPDQVRDILAAAGWADQAPTGRGAARERWDAMQALVSLADDLAAAAPPE
SPATVAGLVAELDERASAQHAPTVEGVTLASLHAAKGLEWDAVFLAGMSEGLMPISLAES
DDAVHEERRLLYVGITRAREHLEVSFGRSRNPGGRATRKRTRFLDGLWPDESRNPRARTA
PKGHARALLTGEHDVALFDALRDWRLEVARETDKPAYTVLTDATLAAIAEIRPSAIAELA
RVDGIGPAKIDRFGATILAIVSAAQSS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgctcacccagaccaactccgtcggcggtccgaatcatcctggaccgctgagccccgac
gcgatcctgaccgccctggaccccgagcagcgcgaggtcgccctcgcgctcaacggcccg
gtggtggtgctcgcgggagcgggcacgggcaagacgcgcgccatcacgcaccgcatcgcg
tacggcgtccggatcggggcgtacaaaccgtccagcgtgcttgccgtgacgttcacggct
cgcgcggcgggggagatgcgcacacgcctgcgcgagctcggcgtccagggagtgcaggcc
cgcacgttccatgccgctgcgctgcgccagctcggctacttctggccgcgcatagtgggc
ggcgcaccgccgcgcctgcaggagtacaaggcgcagctcgtcgcggaggcggcgcgccgc
ctcggcctgagcgtggaccgcgtggccgtccgtgacctgagcagcgaggtcgagtgggca
aaggtctcgctcatcacggcggacgactacgagaaggccgcgcaagcggtgggccgcgag
gcgccgtcgggctacgacggacagaccgtgtcgcgcctgatcacggcatacgaggaggca
aagaccgagcgcggagtcatcgacttcgaggacgtactcctcatgctcggggacatgctg
aacagccacaaggcagtggcggacgaggtgcgttcgcagtaccggcacttcgtcgtcgac
gagtaccaggacgtctccccgctgcagcagttcctgctggaccagtggctgggcgggcgc
agggagctgtgcgtcgtgggtgacccgtcgcagaccatctactccttcaccggcgcctcg
ccgcgccacctcctgcagttccgccgcacctacccggaggcgcaggagatccggctcgtc
cgcgactaccgctccaccccccaggtggtgaacctcgccaacgaggtgctcaagcgcgcc
gggcgagagggtggcgcgcaccaggcgctggagctggtcgcgcagcgcaggcccggcccg
ccgaccgcgttcaccgcgtacgacgacgacgaggccgaggccaagggcatcgccacccgc
gccgcccgcctgatccagtcggggatcaaaccgagcgagatagcggtgctgtaccgcacc
aacgcgcagtccgaggcgttcgaggccgcgttcgccgacgccggtgtgggctacctcgtg
cgcggcggccagcggttcttccagcgcaaggaagtgcgcgacgccatcctgctgctgcgc
ggggccgcccgatccgccgaccccgagctccccatgccggaccaggtacgcgacatcctc
gccgccgccggctgggccgaccaggcgcccaccggccgtggtgccgcccgcgaacgctgg
gacgcgatgcaggcgctcgtctcgctcgccgacgacctggccgccgccgcgcccccggag
agccccgcgaccgtcgccggtctcgtcgccgagctcgacgaacgcgcctccgcccagcat
gccccgacggtcgagggcgtcacgctcgcctcgctgcacgcggcgaagggtctggagtgg
gacgccgttttcctcgccgggatgagcgagggcctcatgcccatctcgctcgcggagtcc
gacgatgcggtgcacgaggagcgtcgcctgctctacgtggggatcacccgcgcccgcgag
cacctggaggtgtcgttcgggcgctcgcggaacccgggcgggcgggccacgcgcaagcgc
acaaggttcctcgacgggctgtggccggacgagtcacgcaacccccgtgcccgcaccgca
ccgaagggtcacgctcgcgcactgctgaccggcgagcacgacgtcgcgctcttcgacgcc
ctgcgcgactggcggctcgaggtcgcccgggagacggacaagcccgcctacacggtgctg
accgacgccacgctggcggccatcgcggagatccgaccttcggccatagccgaacttgct
cgcgtggacggcatcggaccagcgaagatagacaggttcggcgccacgatcctcgcgatc
gtgtcggctgcacagagttcctga
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