Providencia sp. TYF-12: ABE954_02475
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Entry
ABE954_02475 CDS
T11527
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
prov Providencia sp. TYF-12
Brite
KEGG Orthology (KO) [BR:
prov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prov03000
]
ABE954_02475 (soxR)
Transcription factors [BR:
prov03000
]
Prokaryotic type
Helix-turn-helix
MerR family
ABE954_02475 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR
MerR_1
HTH_17
CEP162_C
TetR_N
HTH_IclR
LacI
DUF4085
TnsD
Coprogen_oxidas
HTH_31
HTH_3
Motif
Other DBs
NCBI-ProteinID:
XEL42420
LinkDB
All DBs
Position
551989..552486
Genome browser
AA seq
165 aa
AA seq
DB search
MAEKDTKAIKPRKESGKKIDFTRALTVGEVAKRAGVAVSTVHFYESKGLIQSTRTQGNQR
RFHSVVLRYIAIIKVAQSTGIPLHEIQEALGRFPANSSLTSEQWKEMSTQWRSSLDKRIR
QLTRLRNELDNCIGCGCLSLSDCPLRNPDDVLGKRGPGARILERP
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaagacacgaaagcgataaaaccacgcaaagaaagtggaaaaaaaatagat
tttacaagggcattaaccgttggtgaggtagctaaacgtgctggtgtggcggtgtcgaca
gttcatttttacgagtcaaaagggttgatccaaagtacacgcacgcaaggaaatcaacga
cgttttcactctgtggttctgcgttatattgccatcattaaagttgcgcaaagtacgggg
ataccactacatgaaattcaagaagctttggggcgttttcctgcgaatagttcactcaca
tcggaacaatggaaagaaatgtccacccagtggcgctcttctttagataagcggatcagg
cagttaactcgtttgcgcaatgaattagataattgtattggctgtggttgtttatcactg
agtgattgcccgcttcgcaaccctgatgatgtattgggaaaaagaggccccggcgcacga
attttggaacgcccataa
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