Providencia sp. TYF-12: ABE954_05810
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Entry
ABE954_05810 CDS
T11527
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
prov Providencia sp. TYF-12
Pathway
prov03030
DNA replication
prov03430
Mismatch repair
prov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABE954_05810 (dnaX)
03430 Mismatch repair
ABE954_05810 (dnaX)
03440 Homologous recombination
ABE954_05810 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prov03032
]
ABE954_05810 (dnaX)
03400 DNA repair and recombination proteins [BR:
prov03400
]
ABE954_05810 (dnaX)
Enzymes [BR:
prov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABE954_05810 (dnaX)
DNA replication proteins [BR:
prov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABE954_05810 (dnaX)
DNA repair and recombination proteins [BR:
prov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABE954_05810 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
AAA_22
RuvB_N
AAA_5
AAA_14
PIF1
ResIII
AAA_18
TsaE
AAA_30
AAA_16
AAA_2
AAA_19
AAA_assoc_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XEL43036
LinkDB
All DBs
Position
1332837..1334759
Genome browser
AA seq
640 aa
AA seq
DB search
MSYQVLARKWRPQKFSDVVGQQHVLTALANGLEHQRLHHAYLFSGTRGVGKTTIARLFAK
GLNCEKGITASPCGQCVNCLEIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
TQISEQLELILNAENIEHDLRARQLIARAADGSLRDALSLTDQAIAMGQGKVTADIVSQM
LGTLDDEQPLAIIEALVRADSIAVMTQVEQAASRGADWENLLVEILTQLHRIAMIQLLPA
EQETDPSSIDGRLRQVARVISPADLQLFYQTLLVGRKELPYAPERRMGVEMALLRALAFH
PKSVIEEIEAPPRVITQTVTQSAPQRGAPPQTRAENLPENSPTLQLLKARQTLQSPQSED
PGLKKAKPATSEKAKPAVSALERLAAVTSKHQQNVENKASQGVKAQKPKPYQWKAQNKET
MAQKDAVTTPSEIKEALEYEKTPELAVKIIEEGRERDSWSGTIAKLNIPKLVEQLALNSY
IEELSESQIILHLRSSQKHLDKPQAHKALEEALSEQYGRSVELKIVHDDNSDVKTPLEWR
QAIYEEKLAQARQSIIADKTIQKLRSMFDAQLDEESIRPV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtacttgcccgtaagtggcgacctcaaaaattttcagacgttgttggc
caacaacacgtcttgactgcacttgctaatgggctggagcaccagcggcttcatcacgcc
tatcttttctcgggcacacgaggcgtagggaaaacgacgattgctcgcctttttgccaaa
ggtcttaattgcgaaaaagggatcacggcatccccttgtggtcaatgtgtcaactgcttg
gaaattgaacagggcaggtttgtcgacctaattgagattgacgcagcttcacgaactaaa
gtggaagatacccgcgaattactcgataacgtccaatacgcaccagcacgcggtcgcttc
aaagtctacttgattgatgaagtccacatgctgtcacgtcatagctttaatgccttgttg
aaaacccttgaagagccgccagaacacgtaaaatttcttttggcgacgactgacccacaa
aaacttcccgtgactattttgtcacgttgcttgcagttccatctaaaagcgttagatgtc
actcaaattagcgaacaacttgaattaattcttaatgctgaaaatattgaacatgacctg
cgtgctcgccagctgatagcgagagccgctgatggtagtttacgtgatgcattaagttta
acagaccaagccatcgcgatggggcaaggcaaggtaactgctgacatagtgagtcaaatg
cttggcacactggatgatgagcaaccattagctatcattgaggcattagtccgtgctgat
agcatcgccgtgatgacccaagtggagcaagcggctagccgaggtgcggactgggagaat
ttactggttgaaattttaacccagttacaccgcatcgcgatgatccaacttcttcctgcg
gagcaagaaacagacccatcttcgatagacgggcgcttgcggcaagttgcaagggttatt
tctccagcagatttacagcttttctaccaaaccttgttggtaggaagaaaagaattgccc
tatgcacctgagcggcgtatgggggtagaaatggccttattgcgagcactggcatttcac
cctaaaagtgtaatcgaagaaattgaagcgcctcctcgggtgatcacacaaacggtaaca
cagagtgcacctcaaaggggagcgccgccacaaactcgtgcagagaatttgccagaaaat
agcccaaccttgcagttattaaaagctaggcagaccctgcaatcaccccaaagcgaggac
cctggcctaaaaaaggctaaaccggcgacgtctgaaaaggctaagccggcggtatcagca
ctagaaaggctggccgccgtgaccagcaaacaccaacaaaatgtggaaaacaaagcttca
caaggggtgaaagctcagaaaccaaagccgtatcagtggaaagctcagaacaaagaaaca
atggctcaaaaagatgccgttacgacgccaagtgagatcaaagaagcgttagaatatgag
aaaacccctgaattagcagtaaaaattattgaagaagggcgggagcgagacagctggtcc
gggacaatagcaaaattaaatattcctaagctggttgaacaattagctttgaattcatat
atagaagaattaagtgagtcgcaaattattttacatttgcgttcatctcagaagcacctc
gataagccccaagcgcataaagcgctagaggaagctctgagcgagcagtatggtcgttct
gttgaactgaaaatcgttcatgatgataatagtgatgtgaaaacaccactagaatggcga
caggcgatttatgaagagaaactggcgcaagctcgtcagtcaattattgcggataagacg
attcaaaaacttcgctctatgtttgatgcgcagttggatgaagaaagtattcgccccgtt
taa
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