Providencia sp. TYF-12: ABE954_08955
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Entry
ABE954_08955 CDS
T11527
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
prov Providencia sp. TYF-12
Brite
KEGG Orthology (KO) [BR:
prov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prov03032
]
ABE954_08955 (gyrA)
03400 DNA repair and recombination proteins [BR:
prov03400
]
ABE954_08955 (gyrA)
Enzymes [BR:
prov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABE954_08955 (gyrA)
DNA replication proteins [BR:
prov03032
]
Prokaryotic type
DNA Topoisomerases
ABE954_08955 (gyrA)
DNA repair and recombination proteins [BR:
prov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABE954_08955 (gyrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF5748
Motif
Other DBs
NCBI-ProteinID:
XEL43621
LinkDB
All DBs
Position
2014206..2016821
Genome browser
AA seq
871 aa
AA seq
DB search
MSEIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARIVGDVIGKYHPHGDIAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMAKIAHELLADLEKETVDFVPNYDGTEQIPEVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVINGCLAYIEDEDISIEGLMEHIPGPDFPTAAIINGRRGIIDAYRTGRGKV
YIRASAEVEVDEKSGRETIIVSEIPYQVNKARLIEKIAELVKDKRVDGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKILNLKDIIAAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRKAPTPAEAKAGLIARSWDLGNV
AAMLERAGDDAARPEWLEEQFGVHDGQYFLTEQQAQAILDLRLQKLTGLEHEKLLEEYRE
LLIQIEALLFILRSPERLMEVIREELEIIRDTYNDPRRTEITENTADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARTKDEDFIERLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEQNERITAILPVREYEEGYNVFMATASGTVKKTPL
QEFSRPRSAGIIAVNLNEGDELIGVNLTDGSNEVMLFSAQGKVVRFAEDAVRPMGRTATG
VRGIKLMDNDKVVSLIIPRGEGHILTVTENGYGKRTEAAEYPTKSRATQGVISIKVSERN
GNVVGAIQVDDTDQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEKVVGLQRVA
ETEDDEGLDDENVDENTMENGVDDADINEQD
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagattgccagagaaatcacaccagttaatatcgaagaagagcttaaaagttcg
tatttggattatgcaatgtccgttattgtcggccgtgcacttccggatgttcgagatgga
ctgaagccagtacaccgcagagtactatttgcgatgaatgtattgggaaatgattggaat
aaaccctataaaaaatctgcccgtatagtcggggacgtcatcggtaaataccatccacat
ggtgatatcgctgtttatgagactatcgttcgtcttgcacagcctttctctatgcgttac
atgctggtggatggtcaaggaaacttcggttcagttgatggagactcagctgcggcaatg
cgttatacggaaatccgtatggcgaaaattgctcatgagctactggctgatcttgaaaaa
gaaaccgttgatttcgttccaaactatgatggaacagagcaaattcctgaagtaatgcca
acgaaaatccctaaccttttagttaatgggtcgtcaggtattgctgttgggatggcaact
aatattcctcctcacaatttaggggaagttataaatggttgtcttgcctatatagaagat
gaagatatcagtattgaaggtttgatggagcacataccgggcccagatttcccgactgct
gccatcatcaacggtcgtcgtggtatcatcgatgcttatcgtacagggcgtggtaaggtt
tatatccgtgctagtgcagaagtcgaagtcgatgagaaaagtggccgtgaaaccatcatt
gtcagcgaaataccttatcaagtgaataaagctcgcttgattgaaaaaattgctgaacta
gtcaaagacaaacgtgttgacggtatcagtgcattacgtgatgagtcagataaagacggc
atgcgtattgtcattgaggtaaaacgtgatgcggtgggtgaggttgtcctaaacaacttg
tattcattaactcagctgcaagtttcttttggcattaatatggtggctttacatcaaggc
caaccaaaaatactgaatctaaaagatattattgctgctttcgttcgtcatcgtcgtgag
gttgttacacgccgtaccatttttgaactgcgtaaagcacgcgatagagctcatatactt
gaagcgttagcgattgcattagcgaatattgacccaattatcgagctgatccgtaaggca
ccaacgccagcagaagccaaagcagggctgatagcaaggtcttgggaccttggtaatgtg
gctgcgatgctagagcgtgcaggtgatgacgcggctcgtccagaatggttagaagaacag
ttcggtgttcatgatggtcaatatttccttactgaacaacaagcacaagctattcttgat
ttgcgtttgcaaaagttaacgggtcttgagcatgaaaaattactcgaagaataccgtgaa
cttttaattcaaattgaagctctgttatttattttgcgcagccctgaacgtttgatggaa
gttattcgcgaagaattagaaattattcgtgatacatataatgaccctcgacgtactgaa
attaccgagaataccgcggacatcaatattgaagatttaatcaatcaagaagatgtggtc
gttacgttatctcaccaaggttatgtgaagtatcagcctctgtctgattacgaagcacag
cgtcgtggagggaaaggtaaatcggcagcgcggacgaaagacgaagactttattgaacgc
ctcttggttgccaatacgcacgataccatcttgtgtttctcaagtcgtggtcgcttatac
tggatgaaggtttaccaattaccagaggccagccgtggtgctcgtggtcgtccaatcgtt
aacttattaccacttgaacaaaacgaacgcattacagctatcttacctgtacgagagtac
gaagagggctacaacgtgtttatggcgactgcaagcggtacggtgaagaaaacgccttta
caagaattcagccgtccaagaagcgcaggtattattgcggttaacctaaatgaaggtgat
gaactcattggtgttaatttgaccgatggctcaaatgaagtcatgttgttctctgcgcaa
ggtaaagtggttcgctttgctgaagatgcagtaagaccgatggggcgcactgcaacaggt
gttcgtggtataaaattaatggataacgataaagttgtctctttaattattcctcgaggg
gaaggccatatcttgactgtaacagagaatggttacggtaaacgtactgaagcagcagaa
tatccaacaaaatcacgtgcaactcaaggggttatctccattaaagtgagtgaacgtaac
gggaatgtagttggcgccattcaagtcgatgacactgaccaaatcatgatgatcactgat
gcagggacgttagttcgtactcgagtgtcagaagtcagtattgttggtcgaaatactcaa
ggtgttactctgattagaactgccgaagacgaaaaagttgttggcttacagcgcgttgct
gaaacggaagatgatgaaggtttagatgatgaaaatgtagacgaaaacaccatggaaaat
ggtgtggatgatgcagacatcaatgaacaagattaa
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