Providencia sp. TYF-12: ABE954_15350
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Entry
ABE954_15350 CDS
T11527
Symbol
ycaO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
prov Providencia sp. TYF-12
Brite
KEGG Orthology (KO) [BR:
prov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prov03009
]
ABE954_15350 (ycaO)
Ribosome biogenesis [BR:
prov03009
]
Prokaryotic type
ribosomal protein modification factors
ABE954_15350 (ycaO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
LcnG-beta
Motif
Other DBs
NCBI-ProteinID:
XEL40758
LinkDB
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Position
3312564..3314318
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AA seq
584 aa
AA seq
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MSQTFIPGKDAALEDSIDAFQTKLKKLGFDIEEASWLNPVPNVWSVHIRDKECPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKAISEGDFVHYPNEKWFPLTEDDSLPEG
LLDSRLLKFYDPDNALAASQLIDLQSGNEERGICALPFTRQSDDKTVYIPMNIVGNLYVS
NGMSAGNTANEARVQGLSEVFERFVKNKIIAESISLPTIPADVMARYPSVVEAIDTLEKE
GFPIFCYDASLGGKYPVICVVLFNPQNGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFNAPTFDDEEVAEHTNLETHFIDSSGLISWDLFKDDADYAFADWSFKGTTQEEFATLI
SIFNTLDAEVYIADYNHLGVYACRILVPGMSDIYPVEDLHIANNAMGAYLRDTIINLPDS
QWEKQDYLALIEQLDDDGLDDFTRVRELLGLAVGKDNGWSNLRIGELKSMLALAGGDLEQ
ALAWVEWTQDFNSSVFTAERANYYRCLQTLLLLSQEEQREPTQYYNAFVRMYGKEAVDAA
SAALAGESCFYGLWSIDDELKALPAHQALLAAYEKLQKAKRDNA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacttttatacccggcaaagatgccgctcttgaagattccatcgatgcattt
caaaccaaattaaaaaaattggggtttgatattgaagaagcatcttggttaaaccctgta
ccaaacgtttggtcagtacatattcgcgataaagaatgccctctttgctttactaatggc
aaaggtgcgagcaaaaaagcggcattagcctctgcacttggcgagtattttgaacgttta
tcaactaactacttctttgctgacttttacttaggtaaagcgatttctgaaggggacttt
gttcattatcccaatgaaaaatggttcccactgacagaagatgacagcttgcctgaaggc
ttattagatagccgtctgctcaaattctatgacccagataacgcattagcagcaagccaa
ttaattgatttgcaatcaggtaatgaagaacggggtatttgcgccctaccatttacccgc
caatcagacgataaaacggtttatattccaatgaatatcgttggcaatttatacgtttct
aacggtatgtctgcgggaaatacagcgaatgaagcccgagtacaaggcctttctgaagtc
tttgaacgttttgtaaaaaacaaaattatcgcagaaagtatcagcttaccaacgatccca
gcagacgtgatggcacgttaccctagcgtagttgaagctattgatacccttgaaaaagaa
ggcttcccaattttctgctacgacgcttcattaggtgggaaataccctgtcatttgtgtc
gtgttatttaacccacaaaatggcacttgttttgcctcatttggagctcaccctgacttt
ggtgttgcccttgaacgtaccgtcactgaattactgcaaggtcgtggcttaaaagacctc
gatgtattcaatgccccaacgtttgatgacgaagaagtggctgaacacaccaatcttgaa
actcactttattgattcaagtggtttaattagctgggatctattcaaagatgatgcggat
tatgcatttgcagattggagtttcaaagggacaacccaagaagaatttgcaacgcttatc
agtatcttcaataccttagatgcagaagtgtatattgcggactataaccatttaggcgta
tacgcatgccgtatcttagtaccgggtatgtctgatatttacccggttgaagacctacat
atcgccaataatgcgatgggggcttatttacgcgatactattattaatttgccggatagc
caatgggaaaagcaagactaccttgcccttattgagcaattagatgatgacggtctagac
gacttcacccgtgtccgtgagctacttggtttagctgtgggtaaagataacggctggagc
aacctgcgtattggtgagctaaaatccatgctagcactggctggtggtgaccttgagcaa
gcattagcttgggttgagtggacgcaagatttcaacagttcagtatttactgcagagcgt
gcgaattattatcgttgtttgcaaaccctgctgttgctttctcaagaagaacagcgtgag
cctactcaatactacaacgcatttgttcgtatgtatgggaaagaagcggtggatgcagca
tctgcggctcttgcgggtgaatcatgtttctatggtttgtggtccattgacgatgaacta
aaagcgttacctgcacatcaagccttgcttgccgcttatgaaaaactacaaaaagcgaaa
agagacaacgcataa
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