Prosthecochloris sp. SCSIO W1101: OO006_00300
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Entry
OO006_00300 CDS
T09696
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
prow
Prosthecochloris sp. SCSIO W1101
Pathway
prow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OO006_00300 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prow03019
]
OO006_00300 (recQ)
03400 DNA repair and recombination proteins [BR:
prow03400
]
OO006_00300 (recQ)
Enzymes [BR:
prow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OO006_00300 (recQ)
Messenger RNA biogenesis [BR:
prow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OO006_00300 (recQ)
DNA repair and recombination proteins [BR:
prow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OO006_00300 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UZJ41493
LinkDB
All DBs
Position
complement(65453..67321)
Genome browser
AA seq
622 aa
AA seq
DB search
MTMDTVHPTRSQGEQPSLTAETKLLDTLQKVFGFHTFRKNQESIIQAILDRKDAFAVMPT
GGGKSLCYQLPALLLPGTCIVISPLIALMKDQVDGAKANGIRAAYLNSTLSAEEQSLVLK
DLRSNSLDLLYIAPERFALNHFQDMLKETNISMAVIDEAHCISEWGHDFRPDYLSLAALA
KLFPDTPIAAFTATATHKVQQDILDKLGLRNPFIIRASFDRPNLLYDIRFKENPNAQLAS
ILRNNSGKAGIIYRTSRKSVNETTAMLQAKGFLALPYHAGLGDEERKRNQEAFIRDEVDV
IVATIAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAGRDGEPAQCIMLFSQSDIPKVR
FFIDTMADETERAKAQEALQRVISFASTSVCRRKTLLEYFGEKYPRDNCNSCDICLGSRE
VVDCTVEAQMLLSAIARTEERFGATHIVDIVTGSKNKKIRDFGHDRLKTYGVGKTHGKKF
WRQLIDELMAQKIIAKSEGLYPALYIQEKAIPILKNKARVEMVRIKEPQAPTATLKEAGA
YDHDLFDLLRALRKQLADEQNIPPYIVFSDRSLRDMATLHPMSEDTMLSVSGVGEVKLQR
YGRQFLALIRRYCEEHLKKNER
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggacaccgtgcacccaactcgatcccaaggagagcagccctccctaaccgcc
gagacaaagctgctcgacacgctgcaaaaagtattcgggttccatacattccgtaaaaac
caggaatcgattatccaagccatactcgatcgaaaagacgcatttgccgtcatgccgacc
ggtggaggcaaatcactttgctatcagcttcctgcactgctgcttcccggcacctgcatc
gtaatcagcccactgattgcactgatgaaggatcaggttgacggtgccaaagcaaacggt
atccgcgcggcgtatttgaacagcaccctctctgcagaggagcaatcccttgtcctcaaa
gacctgcggtctaactcactcgatcttttgtatatagcgcctgagcggtttgcactcaac
cattttcaggacatgctcaaagagacgaatatcagcatggcggtaattgacgaagcgcac
tgcatatccgaatggggccatgattttcgacccgactacctttcactcgctgccttggcc
aagctttttcccgatacaccaatagctgcatttacagcaacagccacccacaaggtacag
caggatattctcgataaactcggcctgcgcaacccctttatcatcagagcctcgtttgat
cgcccgaacctcctttacgacattcgcttcaaggaaaaccccaacgcccaacttgcctcg
atcctgagaaacaactccggcaaagccggcatcatctaccgcaccagccgcaaaagcgtc
aacgagacaacggcaatgctccaggcaaaaggctttcttgcgctcccttaccatgccggc
ctgggcgatgaagaacgaaagagaaaccaggaagcgttcattcgagacgaggtcgatgtt
attgttgcaacgatagcgttcggtatgggtatcgataaatcgaacatacgttttgtcatt
catgccgatctgccaaaaagtattgaaaattattatcaggaaaccggcagggccggccgc
gacggggaacccgctcaatgcataatgctcttttcacaatcggacatccctaaagtccgt
tttttcatcgacacgatggccgatgaaaccgagcgggcaaaagcacaggaagcattgcaa
cgcgtgatatcatttgcttcgacatctgtttgcaggcggaaaaccctgctcgagtatttt
ggcgaaaagtacccgcgcgacaactgcaattcctgcgatatctgtcttggctcccgggaa
gtggtagactgtactgtagaggctcagatgctgctctccgcaatcgcccgaaccgaggaa
cgcttcggcgcgacacatatagtcgatatcgtcacaggcagtaagaacaaaaaaatccgt
gacttcggccacgaccgtctcaaaacatacggagtaggtaaaacgcacggcaaaaagttc
tggcggcagcttatcgacgaattgatggctcagaaaataatcgcaaaatccgaagggctc
tacccggccctttacatacaggagaaagctattccgatacttaaaaataaggcaagggta
gaaatggtacggataaaagaaccccaagcgcctacggcaacgctcaaggaagcaggagcc
tacgatcatgacctgttcgacctgctcagagcacttcgtaaacaactcgctgacgaacag
aatattcctccctacattgttttttccgaccgctcccttcgtgatatggccaccctccat
cccatgagtgaggatacaatgctttcagtgtcaggagtaggagaagtaaagctgcagcga
tatggaagacagtttctcgctctcatcagaagatactgtgaagaacacctgaagaaaaac
gaaagataa
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