Prosthecochloris sp. SCSIO W1101: OO006_00845
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Entry
OO006_00845 CDS
T09696
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
prow
Prosthecochloris sp. SCSIO W1101
Brite
KEGG Orthology (KO) [BR:
prow00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OO006_00845 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prow03019
]
OO006_00845 (rnc)
03009 Ribosome biogenesis [BR:
prow03009
]
OO006_00845 (rnc)
03036 Chromosome and associated proteins [BR:
prow03036
]
OO006_00845 (rnc)
Enzymes [BR:
prow01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
OO006_00845 (rnc)
Messenger RNA biogenesis [BR:
prow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OO006_00845 (rnc)
Ribosome biogenesis [BR:
prow03009
]
Eukaryotic type
90S particles
RNase
OO006_00845 (rnc)
Prokaryotic type
rRNA processing factors
OO006_00845 (rnc)
Chromosome and associated proteins [BR:
prow03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
OO006_00845 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
UZJ41583
LinkDB
All DBs
Position
complement(174073..174876)
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AA seq
267 aa
AA seq
DB search
MEKFWQKLGSFAFHRSQGDDKSCTKSNTENGSLTIQDTTIAWFKKLLGYPPSNSKVYVTA
LTHRSIVHDQAEPADSNQRLEFLGDAVLDLIISEHLYTCFPDSDEGKLSSNRAKIVNRKS
LAGFARKISLSEHLLIGESADKSKICSSESTLADAFEALIGAIYLDMGLAETKNFIQRHV
ISHVDLKKLDAVEHNYKSRLIEYTQSRQLAPPVYAVVSEEGAEHEKLFTIEVSCDGKPLG
RGTAGRKKDAEQSAAKEALTTLETGTG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggagaagttctggcaaaaactcggttcattcgcttttcatcgctctcaaggtgatgat
aaatcctgtaccaaaagcaatactgaaaacggttctctaacgattcaggacaccaccata
gcctggttcaagaagcttttgggatatcccccttccaattccaaagtatatgtcaccgca
cttacccacagatcgatagttcatgaccaggccgagcctgccgattccaatcaacgcctc
gagtttcttggcgatgccgtcctcgatctcatcatttccgaacacctgtatacctgcttt
cccgacagcgatgaaggaaaactgtcgagcaatcgggcaaaaatcgtcaatcgaaaatcg
cttgccggttttgccaggaaaatatctctttccgagcacctgcttatcggagaatccgcc
gataaaagtaaaatatgctcgagcgaatcaacgttagcagatgccttcgaggcactcatc
ggtgcaatttatcttgacatgggccttgctgaaacgaaaaattttatccagagacatgtc
atcagccatgttgatctgaaaaaactcgatgccgtcgaacacaactacaaaagccgcctg
atcgaatatacccagtcacggcagcttgcgccgccggtctatgcagttgtttcggaagaa
ggtgccgaacatgaaaagctgtttaccatcgaggtatcttgtgacggcaaacctttgggt
agaggaaccgccggaagaaaaaaggatgccgagcagtctgcagcaaaagaagccttgacg
acgctcgaaacaggcaccggctga
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