Prosthecochloris sp. SCSIO W1101: OO006_02065
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Entry
OO006_02065 CDS
T09696
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
prow
Prosthecochloris sp. SCSIO W1101
Brite
KEGG Orthology (KO) [BR:
prow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prow03400
]
OO006_02065
DNA repair and recombination proteins [BR:
prow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OO006_02065
Archaeal homologous recombinant proteins
OO006_02065
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_27
AAA_21
Rad50_zn_hook
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UZJ41807
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Position
complement(419080..421713)
Genome browser
AA seq
877 aa
AA seq
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MIPKKLTISNFQSYGEEPQELDFERFRIACLTGANAAGKSSLIEAMGWCIWGKGRTGKEG
LINENADEMQVSCVFETSGKTYRVLRKATRKKSGGTTEQVDLHIFDPEADVFQSQNENTL
RLTQKKILDLVGLDYDGFISSSFISQGRSNEFTLKSPKERKEILAQILRIDRYAVLAEKA
KEKTRAIGEEITYLAGRIGTLRDDLSLTPTLRAELKKKSSESKTAEKELTTCVSSCTELE
QQLTAIKGLELEQKALNAQLTSIDSRKEELIVRSTKLREEEAELRSLVDSRDTIEQNIRK
FNELKKELSALEHTSKTIDKLRQESIRIESVKALKTQKASQKAETIEAALHTSDSNLKAL
AEKIELLQADRRILQQLRDEQRLLETSTRKLEEGLDEKDHCVRSLSQLESRIQTLVENLE
DIKKKGLEFKGIEGTICPLCHSTVNEAHKEKVLEEYRIQYRNTEKELADNRIEKKQFETL
WRGFEKKQQELSAQQKRLQTLHSKRSALDERLKQLEELDAAYTQTVKTRETHTEDLLKTR
KALASGTIATEELRKLSEIDAEIVSLGYSPEAHNALKAELETLSDAENRAGALGMATLRL
EKLTIEHETCRQKLDATENERKSLQNRFFEIVDLLEGKPELTKKFERTVQEKKTAENKLR
QLLVEKQTLKKSLDDLAEKEKQRKKLSAELGGKEEIKNILTILQDAFGIKGIQSLLIENA
VPQLEEQANNILGKLTQNQMAFEVRTQKQRINKNITETLEIAISDSQGEVRDYESFSGGE
KFRIDLSLRIALSKLLSIQTGHGLKLLVIDEGFGTQDEDGLDAIIDSIHRITDEFEKIVL
ITHLEKLKDAFEVKIVVSRQPEKGSTFSIVNGDRTLS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgattccgaaaaaactcactatcagcaatttccagagctacggtgaagaaccgcaggaa
ctcgactttgaacgtttcaggatagcctgcctgactggagcgaacgctgccggaaaatcg
agcctcattgaagcgatgggttggtgcatttggggaaaagggcgcacgggcaaagaggga
ctgatcaacgaaaacgccgatgaaatgcaggtatcctgcgttttcgagacaagtggaaaa
acttacagagtactccgtaaggcaacaagaaaaaaaagcggtggaaccaccgagcaggtt
gacctgcacatcttcgaccctgaagccgatgttttccagagccagaatgaaaacacactt
cgtcttacccagaaaaaaattctcgaccttgtcgggctcgattacgatggctttatcagt
tcttcattcataagccagggacggtcaaacgagtttaccctcaaatctccgaaagaacgc
aaggaaatcctggcacagatccttcggattgatcgctacgctgttttagctgaaaaggca
aaggagaaaacaagagcgatcggcgaggaaataacctatcttgcaggcagaatcggcacc
ctgcgtgacgatctttccctcactccgacgttgcgagccgaactgaaaaagaaatcttca
gaatcgaaaacagccgaaaaggagctcaccacatgcgtttcgtcatgcaccgaactcgaa
caacagttgacggccataaaaggactggaacttgaacagaaagcgctcaatgcccagttg
accagcattgattcccgcaaagaagaacttatcgtccgcagcacgaagctccgggaagag
gaagctgaattgcggtcactggtcgacagcagagacactatcgaacagaatatcagaaag
ttcaacgagttgaaaaaagagctctctgctctggaacatacctcaaaaaccatagacaag
ctccgccaggaaagtatacgaatagaatcggtaaaagcactcaaaacacaaaaagcttca
caaaaggctgaaaccatcgaagcagccctgcacacttccgattcaaatctcaaagctctt
gctgaaaaaatagaacttctgcaagccgaccgccggattctgcaacagctgcgtgatgag
cagagactactggaaacatcgaccagaaagctcgaagagggactcgatgaaaaagaccac
tgcgttcgttcactctctcagcttgaaagccgcatacaaacgctggtcgaaaacctcgaa
gacatcaaaaaaaagggactggaattcaaaggtattgaaggcacaatctgtccgctctgc
cactcgacggtcaatgaagcccataaagaaaaggtgcttgaagagtatcgtatccagtac
aggaacaccgaaaaagagcttgcagacaacaggattgaaaaaaaacaattcgaaaccctt
tggcgcggtttcgaaaaaaaacagcaggaactcagcgcacaacaaaaaaggcttcaaacc
ctccattccaaacgttctgcgcttgatgaacggttgaaacagctcgaagaactcgacgca
gcatacacgcaaaccgtaaaaacacgggaaacccatactgaagatctgctgaaaacccgt
aaagctctcgcatcgggaaccattgcaaccgaggaactccgaaaactttcagagatcgat
gcagagatagtttcactcggctacagccctgaagcgcacaacgcattaaaagccgaactg
gaaaccctttcggatgcagaaaaccgtgcaggggcactgggcatggcaacattgcgcctt
gaaaagctgaccattgaacatgaaacctgcaggcaaaaactcgacgccactgaaaacgag
agaaagtcactgcaaaaccgttttttcgaaatagttgacctgcttgaaggtaaaccggaa
ctgaccaaaaagttcgagagaacagtgcaagagaaaaaaacagcggaaaataaactgcgg
cagcttctggttgaaaagcaaaccttgaaaaaaagccttgacgatcttgctgaaaaggaa
aaacagagaaaaaaattatccgctgaactcggcggaaaagaagagataaaaaatattctc
accattctgcaggatgctttcggcatcaagggcattcaaagcctcctgattgaaaatgct
gtaccgcaactcgaggaacaggcaaacaacattctcggcaagctcacccagaaccagatg
gcatttgaagtccgtacccaaaaacagcgtatcaataaaaatatcaccgaaaccctcgaa
atagcaatttcagattcccagggtgaagtcagggactatgaaagtttttcagggggcgaa
aagtttcgtattgacctgtcactcagaatagccctctcgaaacttctttcgatacaaaca
ggtcatggcctgaagttgcttgtcatcgacgaaggcttcggtacccaggacgaagacgga
cttgacgcaatcatagattcaattcatcgtattaccgacgaatttgaaaaaattgtgctc
atcactcatcttgaaaaattgaaagatgcgttcgaggtaaaaatcgttgtgtcccgtcaa
cccgaaaaaggctccacgttttccatcgtnaacggggaccgaacactgtcctga
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