Prosthecochloris sp. SCSIO W1101: OO006_02135
Help
Entry
OO006_02135 CDS
T09696
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
prow
Prosthecochloris sp. SCSIO W1101
Brite
KEGG Orthology (KO) [BR:
prow00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prow01002
]
OO006_02135
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prow01011
]
OO006_02135
Peptidases and inhibitors [BR:
prow01002
]
Cysteine peptidases
Family C82
OO006_02135
Peptidoglycan biosynthesis and degradation proteins [BR:
prow01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
OO006_02135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
UZJ41820
LinkDB
All DBs
Position
435884..437578
Genome browser
AA seq
564 aa
AA seq
DB search
MVVILVLLLVLSPGSSAEASPQKNNVSGTKRIQSTSGGSSDVRENIRCHIEQLEEDVALQ
IGREKVAFNALLADFYRSNDFSPVWVERSQITELLEAIKSVEADGLSPQDYHLDGIQEFY
DDAPSSPFLKARYELLLTDAMFKMSYHLLHGKVDPEKIDSNWNLSKGENGNGLVGSLGNA
LAGDSLSAVISTFRPSHPKYTSLKEGLARYRYIAAGGGWVSIPDGPTIKEPGQYDDRMPA
LRRRLEITGEIEEFTQVDTSYASSALLYSNELMDAVKRFQARLGLDVDGAVGPKTLRALN
VPVSRRIDQIRLNLDRYRWFIQKLEPTFLLVNIAGFTVQYVENWNYRWGSRVIVGEPYWK
TPVFKADMQYIIFNPSWNVPPGILRKEALPAIKNNTGYLARNGLQVIDRSGRVVNPSSIN
WASYSASSLPYRLRQPPGTRNALGRVKFMFPNKHLVYLHDTPSKHLFDKSTRAFSHGCIR
LQNPLELAEILLGWSEDDVQDVIATGKTRTINLPQRIPIFLVYLTALVENDEVLFRDDVY
DRDEAVLSALKEPYPYKTVESCTF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttatactggtattgcttttggtactcagccccggcagttcagcagaagcttct
ccgcaaaaaaacaatgtttccgggactaaacgtattcagtcgacttcaggcggtagcagc
gacgtaagggagaacattcgttgtcacatcgagcaactcgaggaagatgtcgctctgcaa
atcgggagagagaaagttgcattcaacgcattgctggcggatttttacagatcgaacgat
ttcagtcctgtctgggtggagcgttcccagatcaccgaactgctcgaagcgatcaagtcg
gttgaagccgacgggctttctccccaggactaccatcttgacggtatacaggagttttat
gacgatgccccgtcttcgccctttttaaaagccaggtatgagctgttgcttaccgatgcg
atgttcaaaatgtcttatcatttgcttcacggcaaggtagatcccgagaagatcgattcc
aactggaatctctccaaaggtgaaaatggaaacggcctggtcggcagtctcgggaacgct
cttgccggtgactcccttagtgcggttatctcgacgtttcgtccaagtcatcccaagtat
acaagtctcaaagaaggtcttgccaggtaccgttacattgccgccggcggcggttgggtg
agcattccggatggccctaccatcaaggagcccggccagtatgatgatagaatgcctgca
ttgagaaggcggcttgaaataaccggcgaaatcgaggaatttacacaggtcgatacatca
tacgcatcatctgccttattgtacagcaatgaattgatggatgccgtcaaacgttttcag
gcgcgtcttggactcgatgttgacggggcggtcggccccaagacgttgcgggctctcaat
gtgcctgtttctcgaaggatcgatcagatccgactcaatcttgaccggtatcgctggttt
attcagaagctggaacctacgtttctcctggtcaacattgcagggtttacggttcagtat
gttgaaaactggaattaccggtgggggtccagggtcattgttggggaaccttactggaaa
acccctgttttcaaggcagatatgcagtacatcatttttaatccgtcatggaatgttccc
ccgggcattctgagaaaagaagctctgccggcaatcaagaacaatacaggatatctcgca
agaaatggtctgcaggttatcgaccgtagcggtcgtgtggtgaatccgtcttcgatcaac
tgggcgtcatacagtgccagttcgttgccttatcgactgcgtcaaccgcctggtacaaga
aacgcactcggtcgtgtcaagttcatgttcccgaacaagcatctggtctatctccatgat
acgccgagcaagcatcttttcgataaaagcacccgagcgttcagccacgggtgtattcgc
cttcagaaccctctcgaacttgcagagattctacttggatggagtgaggacgatgtccag
gacgttatcgctaccggtaaaaccaggacaattaaccttcctcagagaattcctattttc
ctggtgtaccttaccgctttggtggagaatgacgaagtgttgttcagggatgatgtttac
gaccgtgatgaagcggttctcagtgccctcaaagagccttatccctacaagacagttgaa
agctgtacattttaa
DBGET
integrated database retrieval system
