Prosthecochloris sp. SCSIO W1101: OO006_02645
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Entry
OO006_02645 CDS
T09696
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
prow
Prosthecochloris sp. SCSIO W1101
Pathway
prow03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
prow00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OO006_02645 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
prow03011
]
OO006_02645 (rpsA)
Ribosome [BR:
prow03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
OO006_02645 (rpsA)
Bacteria
OO006_02645 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
Spt6_S1
DUF2110
PCB_OB
MRP-S35
PLD_C
Propeptide_C25
DUF473
Motif
Other DBs
NCBI-ProteinID:
UZJ41914
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Position
554059..555837
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AA seq
592 aa
AA seq
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MSETQTIEQQKVTETNPKNHRVKFFANYEPSELDQMEQLYSSTLNEITEEEIVKGTIVAI
SNKDVTIDVGFKSEGIVSKLEFKDEEELKVGDEVEVYLENIEDKMGQLILSKRKADVLRI
WDKIYDSIENDTIINGKIVNRVKGGMTVSLSGVEAFLPGSQIDVKPVRDFDALVGQTMDF
RVVKINPVTQNIVVSHKVILEEEYAAKREEMLANIKVGMVLEGTVKNITDFGIFVDLGGL
DGLVHITDITWGRINHPSEVVELDQPIKVVVVGFDEETKRVSLGMKQLEPHPWENIEIKY
PVGIKTNGRVVSITDYGAFVEIEKGIEGLVHISEMSWTQHIKHPSQFVSLGQEVECVILN
IDKEHTKLSLSMKRVNEDPWIALSEKYVEGSVHKGTVSNITDFGVFVELEPGVDGLVHIS
DLSWTKKIRHPSELVKKNQELEVKVLKFDVNARRIALGHKQINPDPWDEFEQKYAVGSEC
AGTISQIIEKGVIVILPGDVDGFVPVSHLLQGGVKDIHSSFKVEDELPLRVIEFDKENKR
IILSALEYFKDKSKEEIEEYLKAHPNEKKEIEDASAELESQSKSDDGGNGDK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacgcaaacaatcgaacaacagaaggtaacggaaacaaatcctaaaaaccac
cgggtaaaatttttcgcgaattacgaaccttcggaacttgatcaaatggagcagctctat
tcgagcacgcttaacgagatcacggaagaagagatcgtcaaaggaaccattgtcgcgatt
tcaaacaaagatgtcaccatcgacgttggtttcaagtccgagggtatcgtatcaaagctc
gaattcaaggatgaagaggagctgaaagtcggtgacgaggttgaagtatatctcgagaac
atcgaagacaagatgggtcagcttattctgtcgaaacgaaaagctgatgttctcaggatc
tgggataagatatacgattcaatcgagaacgataccatcataaacggaaagattgtcaat
cgcgtaaaaggtggaatgaccgtttcgctctcgggggtcgaggcgtttcttccaggttca
cagatcgatgtcaaaccggttcgggactttgatgcgcttgtcggacagaccatggacttc
agagttgtcaagatcaatccggtcacccagaatatcgttgtcagtcacaaagtgattctt
gaagaagagtatgcagcaaaacgtgaagagatgctggccaacatcaaggttggtatggtg
ctcgaaggtacggttaaaaatatcaccgacttcggtatctttgtcgatctcggaggtctt
gacggtcttgtgcatattaccgatatcacctggggcaggatcaaccatccgtcagaagtt
gttgaacttgatcagccgatcaaggttgttgttgtcggttttgacgaagaaaccaaaagg
gtttctctcggcatgaagcagctcgagcctcatccgtgggaaaacatcgaaataaaatac
cctgtcggtatcaagacaaacggccgtgttgtttcgattacggattacggtgcatttgtc
gaaattgaaaaaggtatcgaaggtcttgttcatatctctgaaatgagctggacacagcat
atcaagcatccaagtcagtttgtttctctcggtcaggaagtcgagtgtgtcattctcaat
atcgacaaagagcacacaaagctttcgctttctatgaagcgggtcaacgaagatccctgg
attgccctgtcggagaaatatgtcgaaggttcggttcacaaaggcacggtcagcaatatc
accgatttcggtgtttttgttgagcttgagccaggagtggatgggctggtgcacatttcc
gacctttcatggaccaagaaaatccgtcatccaagcgaactggtgaagaagaatcaggaa
ctcgaggtcaaagtgctcaaattcgatgtgaatgcacgtcgtatagcgcttggtcacaag
cagatcaatccggatccatgggatgaatttgaacagaaatacgctgttggttcggagtgt
gccgggacaatatcccagatcatcgagaaaggtgttatcgttatcctaccgggagatgtt
gatggcttcgttccggtatcccatctgcttcagggtggtgtaaaggatattcacagttcc
ttcaaggttgaagatgaattgccgcttcgcgtgatagagtttgataaagagaacaagcgg
atcattctttctgcgctcgagtatttcaaagacaagagcaaagaagagatcgaagagtat
ctgaaggctcatccaaacgaaaagaaagagattgaagatgccagcgctgaactggaatcg
cagtcgaagtctgatgacggaggaaatggcgataagtaa
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