Prosthecochloris sp. SCSIO W1101: OO006_03510
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Entry
OO006_03510 CDS
T09696
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
prow
Prosthecochloris sp. SCSIO W1101
Pathway
prow00550
Peptidoglycan biosynthesis
prow01100
Metabolic pathways
prow01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
prow00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OO006_03510 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OO006_03510 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prow01011
]
OO006_03510 (mrdA)
Enzymes [BR:
prow01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
OO006_03510 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
prow01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
OO006_03510 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UZJ42068
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Position
complement(741896..743707)
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AA seq
603 aa
AA seq
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MDKIRQRAFNVSLVVIAVFAVLFSRLIYLQIFEYKELGSISDANSLRRVWVQPPRGRMID
RNGTVIVDNQPLYSVKVVPAEFTDSLKKNMLAGLLDITFEELSERIQKGFKYNRFAPVAV
GRDIEPQEMMRLSENLWQLPGVMIEVENKRKYPLELGASHILGYLNFISKNQLEEMSQKG
YTPDDKTGSKGLEKKYEDYLRGEKGTRFELVNSIGKSAGKFENGARDRPFIKGNDLYLTL
DTGLQKLAEDLLKETGKSGAVVAIDPRNGGILAMASQPDYDLEILNGTTDSKKWLEIVRN
PDKPLFNRATQASYPPGSVYKLLLAIAALEERAITPEKTIYCTGVFRLGRGRFLCHGGQG
HGPVNLERSIIESCNTYYYNLIFDLGFEKWTEYGRMFGFGKTSGIDLPGERSSPLPSVEY
YDKRYGKGKWTRGYLVSLAIGQGELNTTPLQLAAFTATIANKGTWYQPHFVKGYLPDESD
TIETLDFRKNKLPISEKTFETVRKAMLGVVERGTGRLAAVKNVKVAGKTGTAQNPHGEDH
AWFVAFAPFEEPSIAITVLVENAGYGGSVSAPIAGKLINYYVNGPDTTAVDSLSLTAGHM
TAV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattcggcaaagggcattcaacgtctcgctggttgtcatagcggtctttgct
gtccttttttcgcgcctcatttatcttcaaatcttcgaatacaaggaacttggttccatt
tcggatgccaacagcctgagaagagtatgggtacaacccccgagaggacggatgatcgac
cgaaacggtaccgtgatcgttgacaatcaaccgctgtattcggttaaggttgttcccgca
gaatttaccgactcgttgaaaaaaaacatgcttgccggcttattggatatcaccttcgaa
gaactctcggaaaggatacagaaaggattcaagtataaccgctttgcgcctgttgcggta
ggaagagatatagagccgcaggaaatgatgcgtctcagcgaaaatctctggcaactgccg
ggagtgatgatagaggttgaaaataaaagaaaatacccactggaacttggagcctcgcac
atcctcggttatttgaacttcatctccaaaaaccagctcgaagaaatgtctcaaaaggga
tatacaccggatgacaaaactggtagcaaagggcttgaaaaaaaatacgaggactatctg
agaggagagaaaggcacgcgattcgaactggtcaattcaatcggcaagtctgccggaaaa
tttgaaaacggagccagggatcgtccgttcatcaaaggtaacgacttgtatctaacgctc
gataccggactccaaaaacttgccgaagatcttttgaaagaaaccggaaaatccggagct
gtcgtagctatagatccccgcaatggtggaatacttgccatggcgagccagcctgactat
gaccttgaaatcctgaacggcacaaccgacagcaaaaagtggctcgagatcgttcgcaac
ccggacaaacctttgttcaaccgtgcgacgcaggcgtcttatccaccaggctccgtttac
aagcttttgcttgcaattgcagctcttgaagaaagagccataacaccggaaaaaacaata
tactgcaccggggttttcaggttgggtagaggccggttcctctgccatggaggacaggga
cacggtccggtcaatctggaacggtcgatcatcgagtcgtgtaacacgtattactacaat
ctgatcttcgatctcggatttgaaaaatggaccgagtatggaagaatgttcggattcgga
aaaaccagtggtatcgacctgcccggagagcgttcatccccgctaccgtcggttgagtat
tatgacaaacgatacggaaagggaaagtggaccagaggctatcttgtcagtctggctata
ggccagggtgaattgaacactacaccactccagcttgcggcatttaccgctacaatagcc
aacaaaggaacctggtatcagccccattttgtcaaaggttaccttcctgacgagagtgac
actatcgaaacgcttgatttcagaaaaaacaaactgccgatctctgaaaaaacgtttgaa
acggtccgcaaggcaatgcttggcgttgtcgaaagaggcacgggaagacttgctgcggtg
aaaaatgtcaaggtggcgggtaaaaccggtacagcacagaacccgcacggtgaagatcat
gcatggttcgttgcattcgccccttttgaagaaccctccattgccatcaccgtactggtt
gaaaatgccggctatggtggaagtgtctccgcacctatagccggaaaactgattaattat
tatgttaacggtcctgacaccactgccgttgacagtttatcgttgaccgcaggacacatg
acagcagtgtaa
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