Prosthecochloris sp. SCSIO W1101: OO006_03825
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Entry
OO006_03825 CDS
T09696
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
prow
Prosthecochloris sp. SCSIO W1101
Pathway
prow02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prow00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OO006_03825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prow03000
]
OO006_03825
Transcription factors [BR:
prow03000
]
Prokaryotic type
Helix-turn-helix
Other families
OO006_03825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA_2
AAA
HTH_50
AAA_3
Mg_chelatase
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
UZJ42732
LinkDB
All DBs
Position
complement(806894..808525)
Genome browser
AA seq
543 aa
AA seq
DB search
MRIPVSEKTKTLSLLAEVSRALNYTKDINKVLRDILSIMSEHMNMIRGVITILNRDTNEI
VINESFGLTEEEQARGRYMPGEGIIGNVVKTGKSRVVPRIDEEPQFLDRTGSRNRINTEN
LCFVCVPIKADNEVIGTLSTDRPVFTDDNHTGNTPNQLQEKESIEELVDLLSIIAAMISQ
AVRIKQLDQEERQGEIPNESPDRHEPFSFYRGDVHEIDDELYSTQHRPANIIGSSKAMIA
VFRMIDKIAPTNATALILGESGVGKELVASAIHYKSHRAEKPFIKFNCAALPESIIESEL
FGHEKGSFTGATANRQGRFELADGGTIFLDEIGELTLPVQAKLLRILQEKEFERVGGSKT
LKTDIRVIAATNRDLEDEIENGKFREDLYYRLNIFPITVPPLRERKADILVLADYFVEKY
NALNFKGVRRISTRAIDMFMRYHWPGNVRELENCIERAVILSEDNVIHGYHLPPTLQTAE
SSGTPASGSLQQRLDAIEHEMIIEALKRTKGNMAKAAMQLGLTERVMGLRVKKFGIDYKK
YRP
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcccggtaagtgaaaaaacaaagacactcagccttcttgcagaagtcagccgg
gctctgaattataccaaagacatcaacaaggtactccgggacatactcagcatcatgtct
gaacacatgaacatgatacggggcgtcatcaccatcctgaaccgtgacacaaatgaaatt
gtcatcaatgaatctttcgggctcaccgaagaagaacaggccaggggacgatacatgccc
ggtgaaggcatcatcggaaacgttgtcaaaacaggcaagagtcgggttgtccccaggatt
gacgaagaaccgcagtttctggaccggacaggatcgagaaaccgtatcaacaccgagaac
ctctgctttgtctgtgtaccgatcaaggcggataatgaagtcatcggaacactcagcact
gaccggccggtgtttaccgatgacaatcataccggaaacaccccaaatcagttgcaggaa
aaggagtctatcgaagaacttgtcgatcttctctctataattgccgccatgatatcgcag
gcggttcgcattaaacagcttgaccaggaagagcggcaaggagaaataccaaacgaatcg
cccgaccggcacgaacccttttctttctaccgcggtgatgtacatgaaattgacgacgaa
ctctacagtactcaacaccgccctgccaacatcatcggcagttcgaaagcgatgatagct
gttttcagaatgatagacaaaatcgcgccaacaaacgccacagcacttattcttggtgaa
agcggtgtcggcaaggagttggttgcaagcgccattcattataaaagccaccgtgcagaa
aagccttttatcaagttcaattgcgcggctctgcctgaaagtattatcgaaagtgaactg
ttcggccatgaaaaaggctcttttaccggtgccacagccaaccgccagggaagattcgaa
ctagctgatggcggaacgatttttcttgacgaaattggcgagctaacgctgccggtacaa
gccaaactgctccggattcttcaggaaaaagagttcgagagagttggtggctccaaaacc
ctgaaaaccgatatcagagtcattgcagcaaccaacagagaccttgaagacgaaattgaa
aacggaaagttcagagaagatctctactaccgtctcaacattttcccgataacagttccc
cccttgcgtgaacgaaaagccgatatcctggtactcgccgactatttcgttgaaaaatac
aatgcactcaacttcaagggtgtgcgaaggatatcgacacgagccatagacatgtttatg
cgctaccactggcccggtaacgtaagggaacttgaaaactgcatcgagagagcggtcatt
ctaagcgaagacaatgtcatacacggctaccatctgccaccgaccctgcaaaccgctgaa
tcaagcggcacacctgccagcggctctctgcaacagagactcgatgccatcgaacatgag
atgattatcgaggcattgaaacgcaccaagggcaatatggctaaagccgccatgcagctc
ggcctcactgaacgagtgatggggctacgtgttaaaaaattcggtatcgactacaaaaag
taccgaccgtaa
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