Prosthecochloris sp. SCSIO W1101: OO006_06745 Help Entry OO006_06745       CDS       T09696                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism prow  Prosthecochloris sp. SCSIO W1101 Pathway prow02020   Two-component system prow02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:prow00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     OO006_06745 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     OO006_06745 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:prow03021]     OO006_06745 (rpoN) Transcription machinery [BR:prow03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      OO006_06745 (rpoN) BRITE hierarchy Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID LacI HTH_3 Motif Other DBs NCBI-ProteinID:  UZJ42639 LinkDB All DBs Position complement(1442616..1444061) Genome browser AA seq 481 aa AA seqDB search MPDIKLXASQRTQLSSQQIMTSQLLQLPLMHLEQRIFDELQDNPMLELEEQKGESVDDSG GKSGDEPEEGMFDSVDRFEKDGAGETDGGKKDDQEGRLQFTIDNRPKESFIQAVQQDSCE EKLLKDLSLQEGIGTRELLIAIEILGNLDDDGYLKEDFPVIVYGLGQNGIEVDEWEVKSI LKRIQYLDPPGIGVHNLQERLLIQLEAKTGRDKTPSDTLALHILAEHYDDFLNNRYERIL KLLQISPSQLESAITVISTLDPHPFVAGVSADEYIVPDFIVTYENGRLTAVLNDRSNMTV HVSGEYQDVLKSRGVPTEDRKYMRQKLSRAKEFASAIAQRRNTLIKVIEALMNFQYDFFV TGPEKLVPLVMKDVAEKTGFDLSTISRAVNGKYVQTRFGTFELKYFFSGSLPTEEGEDLS TKIIKQYIKELIDAEDSAKPLNDDKLAKMLEEKGIKIARRTVAKYREQMQIPVARLRKKI F NT seq 1446 nt NT seq  +upstreamnt  +downstreamnt atgccagacattaagcttcangcaagccagagaactcagctgtcttctcaacagattatg acaagtcagctcctccaacttccgttaatgcatctcgagcagcggattttcgatgagttg caggataatcccatgctcgaactcgaggagcagaaaggggaatcggtagatgattccggt ggaaagagtggtgatgaacctgaagaggggatgttcgattctgtcgatcgctttgaaaaa gacggggcgggggaaaccgatggaggaaaaaaggacgatcaggaaggaaggctgcagttt accattgataatcgtccgaaagagagttttatccaggcggttcagcaggattcttgcgag gaaaaactgttgaaagacctttcattgcaggaaggaatcggtaccagggagttgctgata gcaattgaaattctcggaaatctcgatgatgacggttatttgaaggaagattttccggtt atcgtctacggactcggacaaaacggtatcgaagttgatgagtgggaagtgaagagcatt ctcaaaaggatacagtatctggaccctccgggtataggtgttcataatcttcaggaacgg ttgcttattcagcttgaagcgaaaaccggtagagacaagaccccgtccgatactctggcc ttgcatattcttgcagagcattacgatgattttctcaataaccgttatgagcggatcctc aagctgttacagatcagtccgtcacagcttgaatcggcaataactgtcatttccacactt gaccctcatccttttgttgccggggtcagtgctgacgaatacatcgttcccgacttcatc gtgacatatgaaaacggtcgcctgactgcggtgctgaatgatcgaagcaatatgacggtt cacgtctcgggagagtaccaggatgttctcaagagtaggggggttcccaccgaagacagg aagtacatgcgccagaagttgagtcgtgcaaaagagttcgcaagtgccattgcccagcgt cggaacacactcatcaaggtcatagaggctttgatgaattttcagtatgatttttttgtt accggtcctgagaaactcgtacctctcgttatgaaggacgtagctgaaaaaacagggttc gatctttcgacgatcagcagggcggtgaatggaaagtatgttcagaccagattcggtacc tttgaactcaaatattttttcagtggtagcttgcctaccgaagagggtgaggatctttcg acaaagatcatcaaacaatatataaaagagctgattgatgccgaagactctgcaaagccg ctgaacgatgataagcttgcaaagatgcttgaggagaaaggcataaagattgctcgcaga acggttgcaaaataccgtgaacaaatgcaaattccagtagcaagattaagaaaaaaaata ttttaa

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