Prosthecochloris sp. SCSIO W1101: OO006_07725
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Entry
OO006_07725 CDS
T09696
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
prow
Prosthecochloris sp. SCSIO W1101
Brite
KEGG Orthology (KO) [BR:
prow00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prow01011
]
OO006_07725
Enzymes [BR:
prow01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
OO006_07725
Peptidoglycan biosynthesis and degradation proteins [BR:
prow01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
OO006_07725
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
UZJ40265
LinkDB
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Position
complement(1648458..1650290)
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AA seq
610 aa
AA seq
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MSGIVANLLNDTVFVRVAHFYIFPAVLLLLQTVVFSDSFAGKKGNVADDSAVAEILDSYV
TTTYFSDKKFKKWKDGGIDGYHATFIPQFDDETYSERIARLNRQTPLRLTYNSHVKGFIK
LYSVDKRKLTAKVLGLADMYFPLFEKKLRQYNIPLELKYLAIVESALKPTAVSRANAKGL
WQFIYGTGKMYGLESSAFVEDRFDPEKATIAACRHMRDLYNIYGDWFLVLAAYNSGAGNV
NKAIRRSGGARDYWSIWPHLPSETRGYVPAFIAVTYIMNYYREHNISSIEPVYSYDDIGA
VRVSEIVAFDQVSEVIGVSVEDLQLLNPQFKLNLVPAGAGNPYYLKLPKEYLGKFNRKEK
KIYAHKTRQGLDGAALLTKAREVKAVSPKAVSPKKQKKNIHVVRRGQTLASIARTYRCYV
SDLIRWNNLKSSKIYPGQKLKVFGKPGAGSPAKSSIMYHKVKRGESLGLIAGKYGVSVSK
LASWNNLGRXRTIYPGQRLKIYGVSTRTSSKKPSYHKVKRGESLGLIAGKYGVSVSKLAS
WNNLGRKRTIYPGQKLKLSAPTKIHKVRRGESLGLIARKYGVSVGQLVSWNKLGGKRTIY
PGQRLTIKTN
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaggaattgttgcaaaccttcttaacgatacggtgttcgtgagagtcgctcatttc
tacattttcccggcagtcctgctgcttctgcaaactgttgttttttccgacagttttgcg
ggcaagaaaggtaatgttgctgatgactcggcggtggctgaaatactggacagctatgtg
acgacaacatatttcagcgacaagaaattcaaaaaatggaaagacggtggtattgacggg
tatcatgctacattcattccgcagtttgacgatgaaacctattcggaaagaattgcccgg
ttaaatcgtcaaacgccactcaggcttacttataacagccatgtcaaaggctttatcaag
ctgtattcagttgataaacgcaagctgaccgcaaaggttctcggtttggccgatatgtat
tttcctcttttcgaaaaaaagctccggcagtacaatatccctctcgagctgaagtatctg
gcaatcgtagagtcggcactcaaaccgactgcggtttcacgggcaaatgcgaaagggctc
tggcaattcatttatggaaccggaaagatgtatggtctcgagtcgtcagcctttgtcgag
gaccgtttcgatccggagaaagcaaccatcgccgcatgcaggcacatgcgagatctttat
aatatatatggggactggtttcttgtgcttgccgcctacaactccggagccggaaatgtg
aacaaggcgattcggcgatcgggcggtgccagggattactggtccatctggccgcatctt
ccttcggaaaccaggggatatgtgcctgcttttattgcagttacctatatcatgaactat
taccgtgagcacaatatcagctctattgaaccggtgtattcgtatgacgatatcggggcg
gttcgtgtatcggagattgttgctttcgatcaggtaagcgaggttatcggtgtttctgtc
gaggatcttcagcttctcaatcctcagttcaagctgaatcttgttcctgctggtgccggt
aatccttactatttgaaacttcctaaagagtatctcggcaagtttaaccgaaaagaaaag
aaaatctacgctcacaagacccggcagggacttgatggagcggctttactcacgaaagct
cgagaagtgaaggctgtttctcccaaagctgtttctcccaaaaagcagaaaaaaaacata
catgtcgtaaggcgcggtcagacgttggcctcgatagccagaacctaccgttgctatgtc
agtgatcttatacggtggaacaacctgaaaagttcgaagatttatccgggacagaagctc
aaggtgttcggaaaaccgggagccgggagtccagcaaaatcttccatcatgtatcacaag
gtgaagcgcggtgaaagccttggtctaatagccggaaaatacggcgtcagtgtgagtaaa
ctcgcttcctggaacaatcttgggcgnnnncgcacgatatatcccggtcagaggctcaag
atttatggtgtgtctacccgtacatcatcgaaaaaaccaagttatcacaaggtgaagcgc
ggtgaaagtcttggtctaatagccggaaaatacggcgtcagtgtgagcaagcttgcttcc
tggaacaatcttgggcgtaaacgcacgatatatcccggtcagaaacttaaactttctgct
ccgactaaaattcacaaagtcaggaggggagaaagccttggcctgatagccaggaaatat
ggggtgagtgtcggtcagcttgtctcttggaacaaattaggcggaaaacgtacgatatat
cctggacaacggcttacaatcaagacaaattga
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