Prosthecochloris sp. SCSIO W1101: OO006_11060
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Entry
OO006_11060 CDS
T09696
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
prow
Prosthecochloris sp. SCSIO W1101
Pathway
prow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OO006_11060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prow03019
]
OO006_11060
03016 Transfer RNA biogenesis [BR:
prow03016
]
OO006_11060
Enzymes [BR:
prow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OO006_11060
Messenger RNA biogenesis [BR:
prow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OO006_11060
Transfer RNA biogenesis [BR:
prow03016
]
Prokaryotic type
tRNA degradation factors
OO006_11060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
KH_PNO1_2nd
KH_NusA_1st
KH_KhpA-B
aRib
CTD9
Motif
Other DBs
NCBI-ProteinID:
UZJ40884
LinkDB
All DBs
Position
2397411..2399606
Genome browser
AA seq
731 aa
AA seq
DB search
MFIRKAIDLEGGKAITIETGKMAKQADGAVVASMGDTMVLATVVSSKTPPPPNQDFFPLQ
VEYREKYSAAGKFPGGFIKREGRPSEKEILSARLIDRALRPLFPDGYYQDTQIIISVISS
DQLNDADVLGGIAASAAIMVSDIPFSNSMSEVRVGRINGEFIINPNINELSRSDIDISIG
GTAGTICMLEGEMDEISEAEMLDAIRFGHEAIKKICSLQDEIAAEVAKPKRSFLPIAAPE
DLQESIAELCAVSLKELAYMPLAKEERAEKTSEIYKSVTQKILARYKEEISADDIAADPA
KALYLNEQIISGHIHDIEKKVMRHMILDDAKRLDGRTLEEVRPISIELGLIPRAHGSALF
TRGETQALVTLTLGTKKDAQMIDTLIDDTEKRFMLHYNFPPFSVGETGRVGGVGRREIGH
GNLAERAVKKVAPSDTEFPYTIRIVSDILESNGSSSMASVCGGTLAAMDGGVPLTKPVSG
IAMGLIKEGERYAVLSDILGNEDHLGDMDFKVAGTRDGITACQMDIKIDGLDYHILEQAL
EQSKKGRLHILEKMTDAISDPREEIGRYAPRLSTIQVPVDAIGMIIGKGGETIRSITEET
GAEINVEDDGTVTIAAPSGEGASAAIETIKTLISKPEVGLVYSGKVRDIREELGAFVEFL
PKTDGLVHISEIAKERVSKVSDYLKPGDRIKVKLIDIRKDPRTGKTRYALSMKALLDVPP
ESENGSPAQGE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtttatacgcaaagcaatcgatctggaaggcggaaaagctatcactatcgaaaccggg
aaaatggcgaaacaggccgatggggccgttgtcgcaagtatgggcgacaccatggttctt
gcaaccgtggtctccagtaaaactcctcccccaccgaatcaggacttcttccctcttcag
gtcgagtatcgtgaaaaatattccgcagccggaaaattcccgggcgggttcataaaacgt
gaaggcaggccttctgaaaaagagatcctctccgcccgcctcatcgaccgcgctcttcgc
ccgcttttccccgatggttattaccaagacacacaaatcatcatctcggtcatctcctcc
gaccagcttaacgatgccgatgtacttggaggcattgctgcatctgccgccatcatggtt
tccgatattccgttttcaaactccatgtcggaagttcgtgtcggcaggatcaacggtgag
tttatcatcaacccgaatatcaacgaactgtcaagaagcgacatcgatatcagcattggg
ggcacagccggtacaatctgtatgcttgaaggcgaaatggacgagatatccgaagctgaa
atgctcgacgcaatccgttttggacatgaagccatcaaaaaaatctgttccttgcaggac
gaaatcgccgcagaagtagcaaagccaaaacgatcgttcctcccgattgcagccccggag
gacttacaggaaagcatcgcagaactgtgtgcggtttccctgaaagaacttgcttatatg
cctctcgctaaagaggaacgcgcagaaaaaacttcggagatatacaagtccgtaacgcaa
aaaatcctcgcccgttacaaggaagaaatctctgccgatgacatcgccgccgatcctgca
aaggctctttatctcaatgaacagattatttcaggtcatatccatgatatcgagaaaaaa
gtgatgcgccacatgattctcgatgacgccaagcgtcttgacggcagaacactcgaagag
gtcagacccatcagtatcgaactcggtcttatccccagggctcatggttcggcgctcttc
accagaggtgaaacccaggcgctcgtcacgctgacgctgggcacgaaaaaagacgctcag
atgatcgacacccttatcgacgatactgaaaagcggtttatgctgcactataattttcca
cccttttcagttggcgaaaccggacgtgtaggaggtgtaggacgccgtgaaatcggccat
ggaaaccttgcagaaagagctgtcaaaaaagtggcaccttccgatacagaattcccttac
accattcgtatcgtatccgacattctcgaatcgaacggctcttcatccatggcgtccgta
tgcggaggaactcttgctgcaatggatggcggcgtacctctcacgaaaccggtatcgggt
attgccatggggcttatcaaagaaggtgaacgatatgcggttctctccgatattctcggt
aacgaagatcatctgggagatatggacttcaaggtagccggaaccagagacggtatcacg
gcatgccagatggacatcaagatcgacggtcttgattatcatattcttgaacaagccctc
gagcagtctaaaaaaggacgcttgcatatcctcgaaaagatgaccgatgcaatttccgac
ccgagagaggaaatcggcagatatgcaccgcgcctttcgaccatccaggtaccggtagat
gcgatcggcatgatcatcggcaagggtggcgaaacgatcagaagcataacggaagaaaca
ggcgcggaaatcaatgtggaagacgacggtacggttaccattgccgcaccgagcggagaa
ggagcatctgcggcgatagaaacgatcaagacgctcatctcgaaaccggaagtcggcttg
gtttattccggcaaggtccgcgacatacgagaagaactgggcgcgtttgtcgaattcctc
ccgaaaaccgatggacttgtccacatctctgaaattgcaaaagaaagagtctcgaaggtg
agtgactatctgaaacccggagaccgtataaaagtcaagctgatcgacatccgtaaggat
cccagaacaggtaagacacgttatgcactatccatgaaagcactgcttgacgttccaccg
gaatccgaaaacgggtcaccggcacagggagagtaa
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