KEGG   Prosthecochloris sp. SCSIO W1101: OO006_12725
Entry
OO006_12725       CDS       T09696                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
prow  Prosthecochloris sp. SCSIO W1101
Brite
KEGG Orthology (KO) [BR:prow00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:prow03032]
    OO006_12725
   03036 Chromosome and associated proteins [BR:prow03036]
    OO006_12725
   03400 DNA repair and recombination proteins [BR:prow03400]
    OO006_12725
DNA replication proteins [BR:prow03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    OO006_12725
Chromosome and associated proteins [BR:prow03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    OO006_12725
DNA repair and recombination proteins [BR:prow03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      OO006_12725
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 Spiralin DUF2267
Other DBs
NCBI-ProteinID: UZJ41193
LinkDB
Position
complement(2739609..2739881)
AA seq 90 aa
MSKAELVEKIASQAGLTKADAERAVNAFVNVVTAGLKAGDDITLVGFGTFSTGERAERQG
RNPQTGETITIAAKKVVKFKPGKALKEEVA
NT seq 273 nt   +upstreamnt  +downstreamnt
atgtctaaagctgagttagttgaaaagatcgcatcccaggcagggttaaccaaagccgac
gcggaaagggctgtgaacgcctttgtgaatgttgtgacagctggtcttaaagcaggtgat
gatatcacgcttgttggtttcgggactttttccacaggtgaaagagccgaacggcaggga
cgaaaccctcagacaggcgagacaattaccatcgcagcgaaaaaagttgtgaagttcaag
cctggtaaggcattgaaagaagaggtggcctga

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