Promicromonospora sp. MS192: ACO229_07080
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Entry
ACO229_07080 CDS
T11467
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
proz Promicromonospora sp. MS192
Pathway
proz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACO229_07080 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
proz03400
]
ACO229_07080 (recD)
Enzymes [BR:
proz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACO229_07080 (recD)
DNA repair and recombination proteins [BR:
proz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACO229_07080 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
RecD_N
NAT10_TcmA_helicase
AAA_22
SH3_13
UvrD-helicase
TraI_hel_assoc_N
CbiA
AAA_29
TrwB_AAD_bind
AAA_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XRE16033
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Position
1585340..1587172
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AA seq
610 aa
AA seq
DB search
MTPAIERWTSDDPHDARRALGATGLLRTFNDAGVLTAADVHVARRTADAAGEDDETVRLA
VALAVRAVRQGSVCVDLGGFDDGGVPDSASVGAGADDTPLPWPAADGWLDRVAASPLAER
SVVRADLGLLYLDRYWREERQVRDDLVARLASPAPAVDDALLEDSAARLFPGDAYAEQRA
AALSTARRLTTVLTGGPGRGKTTTVAGLLALLAEQAEHAGRRRLRIALAAPTGKAATRLQ
EAVTDSLGAPPEAGRPEYTTDDRRRLAGLQAGTLHRLLGWRPGSSTRFRHDRCNRLPHDV
VVVDETSMVSLTLMARLLEAVRPDARLVLVGDPDQLASVEAGAVLADLVAGLHEHDDGVV
SALVTDHRSESEAITRLAAAIQDGDPEAVLAALTAGDGVVELVPSDDAAELAGLEDELTR
HALDVRGLALAGNARGALAAADRHRLLCAHREGPWGAAHWNRLVERRLWEASGAYLGTAV
GTEWYAGRPVLVTANDYSLGLSNGDTGVVVAEGENLRAHLGGGASFAVSRLGDVETLHAM
TVHKSQGSQAEEVTVLLPDESSPLLTRELFYTAVTRARRRVRVVGTPEAVRTTVQRRARR
ASGLTRRLSQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgcgatcgagcgctggaccagcgacgacccccacgacgcccgccgcgcgctg
ggcgcgacgggactgctgcgcaccttcaacgacgccggcgtgctcaccgccgccgacgtg
cacgtcgcgcgccgcacggctgacgccgccggcgaggacgacgagaccgtgcgcctcgcc
gtggcgctcgcggtgcgggcggtgcgccaggggtcggtctgcgtggacctgggcgggttc
gacgacggcggggtgccggacagcgcctccgtcggggccggcgccgacgacacgccgctg
ccctggcccgccgccgacggctggctcgaccgggtagcggccagcccactcgccgagcgg
tcggtagtacgggccgacctcggcctgctctacctcgaccgctactggcgcgaggagcgg
caggtgcgcgacgacctcgtcgcccgcctcgcctcgcccgccccggcggtcgacgacgcc
ctgctggaggacagcgctgcacggctgttccccggcgacgcatacgccgagcagcgcgcg
gcggccctgtccaccgcgcgtcgcctgacgaccgtactcaccggcggtcccggccgcggc
aagacgacgaccgtggccggcctgctcgccctgctcgcggagcaggccgagcacgccggc
agacgccgcctgcgcatcgcgctcgccgcacccaccgggaaggcagccacgcgtctgcag
gaggcggtgacagactcgctcggtgcacccccggaggccgggcggccggagtacaccacc
gacgaccggcgccgcctcgccgggctccaggccggcacgctgcaccggctgctgggctgg
cggcccgggtcgagcacccggttccggcacgaccgctgcaaccgcctgccgcacgacgtc
gtcgtggtcgacgagacctcgatggtctcgctcaccctcatggcccggctgctggaggcg
gtgcgccccgacgcacggctcgtcctcgtgggcgaccccgaccagctcgcgtccgtcgag
gccggcgccgtcctcgccgatctcgtcgccgggctgcacgagcacgacgacggcgtcgta
tcggccctggtcaccgaccaccgctcagagagcgaagcgatcacacggctggccgccgcg
atccaggacggcgacccggaagcggtgctcgccgcgctgacggccggcgacggagtcgtg
gagctcgtgccttctgacgacgcggccgaactcgccggcctcgaggacgagctgacccga
cacgccctcgacgtccgcggcctggcgttggcgggcaacgcacgcggggcgctcgccgcg
gccgatcggcatcggctgctgtgcgcccaccgcgagggcccgtggggcgcggcgcactgg
aaccggctggtcgagcgccggctgtgggaggcctccggcgcctacctcggcaccgcggtg
ggcacagagtggtacgcggggcggcctgtgctggtcacagcgaacgactacagcctcggg
ctgtccaacggcgacaccggggtggtcgtcgccgagggcgagaacctgcgcgcccacctc
ggcggtggcgcgtcgttcgcggtctcccggctgggcgacgtcgagacgctgcacgcgatg
accgtgcacaagagccagggcagccaggccgaggaggtgaccgtgctgctaccggacgag
tcctccccgctgctcacgcgcgagctgttctacaccgcggtgacacgggcgcggcgacgg
gtgcgggtcgtcgggaccccagaagcggttcgtacgaccgtgcagcggcgggcgcggcga
gccagcgggctcactcgccggttgagccagtga
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